Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LINC00628-201ENST00000628516 1289 ntBASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AC009093.7-201ENST00000623853 1223 ntBASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 AC126755.1-201ENST00000525846 6405 ntBASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RPH3AQ9Y2J0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 PCDHB19P-201ENST00000570871 2371 ntBASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms