Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 KRT90P-201ENST00000549264 1064 ntBASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 DUX4L45-201ENST00000566406 1057 ntBASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 RHOXF1P1-202ENST00000635473 501 ntBASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CRAMP1Q96RY5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CRAMP1Q96RY5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 HAUS4P1-201ENST00000406739 1145 ntBASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 BCYRN1-201ENST00000418539 200 ntBASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 AC022137.2-201ENST00000503482 481 ntBASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 AC026410.3-201ENST00000514280 936 ntBASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 GNRHR2-203ENST00000581100 1187 ntBASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 AC010328.2-201ENST00000597698 1111 ntBASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 AC008687.7-202ENST00000637404 953 ntBASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRAMP1Q96RY5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 HTR7P1-202ENST00000624664 4411 ntBASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 AC134407.2-201ENST00000625089 1978 ntBASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 KRT18P43-201ENST00000469825 1281 ntBASIC19.5■□□□□ 0.71
CRAMP1Q96RY5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms