Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 PRYP6-201ENST00000514804 343 ntBASIC16.68■□□□□ 0.26
PAF1Q8N7H5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 AC027307.2-201ENST00000591252 911 ntBASIC16.68■□□□□ 0.26
PAF1Q8N7H5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 PCDHA14-201ENST00000506751 2298 ntBASIC16.68■□□□□ 0.26
PAF1Q8N7H5 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAF1Q8N7H5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 OR2I1P-210ENST00000642037 4691 ntBASIC16.67■□□□□ 0.26
PAF1Q8N7H5 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 AC004461.1-201ENST00000412461 403 ntBASIC16.67■□□□□ 0.26
PAF1Q8N7H5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 AP006288.1-201ENST00000446065 395 ntBASIC16.67■□□□□ 0.26
PAF1Q8N7H5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 AC022145.2-201ENST00000598203 171 ntBASIC16.67■□□□□ 0.26
PAF1Q8N7H5 AC105339.1-204ENST00000636249 355 ntBASIC16.67■□□□□ 0.26
PAF1Q8N7H5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAF1Q8N7H5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms