Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 HLA-J-203ENST00000494367 1087 ntBASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 AC024267.1-201ENST00000582320 895 ntBASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 MIR4321-201ENST00000592276 80 ntBASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 AC023824.1-201ENST00000562945 2975 ntBASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 AC105917.1-201ENST00000506637 2539 ntBASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 AC004449.1-201ENST00000564240 433 ntBASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 NIFKP4-201ENST00000567275 1192 ntBASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 AP001059.3-201ENST00000619053 235 ntBASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD3Q7Z3D4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LYSMD3Q7Z3D4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms