Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.33■□□□□ 0.69
RNF20Q5VTR2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.33■□□□□ 0.69
RNF20Q5VTR2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RNF20Q5VTR2 AP005117.1-202ENST00000581724 1908 ntBASIC19.33■□□□□ 0.69
RNF20Q5VTR2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF20Q5VTR2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF20Q5VTR2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF20Q5VTR2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF20Q5VTR2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RNF20Q5VTR2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 GPX1P2-201ENST00000429271 606 ntBASIC19.33■□□□□ 0.68
RNF20Q5VTR2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 SPCS2P4-201ENST00000436160 681 ntBASIC19.33■□□□□ 0.68
RNF20Q5VTR2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 TIMM8BP1-201ENST00000452384 211 ntBASIC19.33■□□□□ 0.68
RNF20Q5VTR2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 KRT8P48-201ENST00000515599 1220 ntBASIC19.33■□□□□ 0.68
RNF20Q5VTR2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 AP001282.1-201ENST00000531301 1499 ntBASIC19.33■□□□□ 0.68
RNF20Q5VTR2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF20Q5VTR2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 MIR346-201ENST00000362234 95 ntBASIC19.32■□□□□ 0.68
RNF20Q5VTR2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 AP000842.3-202ENST00000569238 1080 ntBASIC19.32■□□□□ 0.68
RNF20Q5VTR2 AC005829.1-201ENST00000570002 483 ntBASIC19.32■□□□□ 0.68
RNF20Q5VTR2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF20Q5VTR2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 ELL2P1-201ENST00000413990 1906 ntBASIC19.31■□□□□ 0.68
RNF20Q5VTR2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 ALG1L5P-201ENST00000482043 771 ntBASIC19.31■□□□□ 0.68
RNF20Q5VTR2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 LINC01225-203ENST00000563550 1244 ntBASIC19.31■□□□□ 0.68
RNF20Q5VTR2 AC061975.2-201ENST00000581722 295 ntBASIC19.31■□□□□ 0.68
RNF20Q5VTR2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF20Q5VTR2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms