Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN8P56748 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN8P56748 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLDN8P56748 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN8P56748 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN8P56748 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN8P56748 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN8P56748 AC092850.2-201ENST00000623821 2697 ntBASIC15.4■□□□□ 0.06
CLDN8P56748 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN8P56748 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN8P56748 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CLDN8P56748 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN8P56748 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN8P56748 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CLDN8P56748 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN8P56748 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN8P56748 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN8P56748 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 AC034105.1-201ENST00000563488 319 ntBASIC15.39■□□□□ 0.05
CLDN8P56748 AC018845.2-201ENST00000568326 409 ntBASIC15.39■□□□□ 0.05
CLDN8P56748 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN8P56748 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN8P56748 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 AC136621.1-201ENST00000624017 2304 ntBASIC15.39■□□□□ 0.05
CLDN8P56748 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN8P56748 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN8P56748 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN8P56748 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN8P56748 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CLDN8P56748 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLDN8P56748 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
CLDN8P56748 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.38■□□□□ 0.05
CLDN8P56748 KRT18P2-201ENST00000447938 1258 ntBASIC15.38■□□□□ 0.05
CLDN8P56748 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDN8P56748 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.38■□□□□ 0.05
CLDN8P56748 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
CLDN8P56748 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.38■□□□□ 0.05
CLDN8P56748 KRT126P-201ENST00000549467 1181 ntBASIC15.38■□□□□ 0.05
CLDN8P56748 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.38■□□□□ 0.05
CLDN8P56748 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 CICP13-201ENST00000422015 2789 ntBASIC15.38■□□□□ 0.05
CLDN8P56748 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
CLDN8P56748 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDN8P56748 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
CLDN8P56748 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDN8P56748 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN8P56748 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN8P56748 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.37■□□□□ 0.05
CLDN8P56748 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 247.7 ms