Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CD58P19256 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.39■□□□□ 0.37
CD58P19256 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.39■□□□□ 0.37
CD58P19256 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.39■□□□□ 0.37
CD58P19256 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CD58P19256 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.39■□□□□ 0.37
CD58P19256 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CD58P19256 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.39■□□□□ 0.37
CD58P19256 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.39■□□□□ 0.37
CD58P19256 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.39■□□□□ 0.37
CD58P19256 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.39■□□□□ 0.37
CD58P19256 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD58P19256 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CD58P19256 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 AC046158.3-201ENST00000624947 2558 ntBASIC17.38■□□□□ 0.37
CD58P19256 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD58P19256 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
CD58P19256 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 AL139400.1-201ENST00000366220 510 ntBASIC17.38■□□□□ 0.37
CD58P19256 FAM220BP-201ENST00000377689 816 ntBASIC17.38■□□□□ 0.37
CD58P19256 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CD58P19256 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.38■□□□□ 0.37
CD58P19256 TSEN15P1-201ENST00000423257 515 ntBASIC17.38■□□□□ 0.37
CD58P19256 SPDYE14P-201ENST00000442619 822 ntBASIC17.38■□□□□ 0.37
CD58P19256 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.38■□□□□ 0.37
CD58P19256 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.38■□□□□ 0.37
CD58P19256 AC026150.2-201ENST00000564693 1156 ntBASIC17.38■□□□□ 0.37
CD58P19256 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.38■□□□□ 0.37
CD58P19256 AL365330.1-201ENST00000607459 531 ntBASIC17.38■□□□□ 0.37
CD58P19256 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.38■□□□□ 0.37
CD58P19256 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.38■□□□□ 0.37
CD58P19256 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD58P19256 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CD58P19256 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.38■□□□□ 0.37
CD58P19256 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD58P19256 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CD58P19256 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CD58P19256 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.37■□□□□ 0.37
CD58P19256 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.37■□□□□ 0.37
CD58P19256 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.37■□□□□ 0.37
CD58P19256 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 AC109322.1-201ENST00000524499 1264 ntBASIC17.37■□□□□ 0.37
CD58P19256 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 AC061975.2-201ENST00000581722 295 ntBASIC17.37■□□□□ 0.37
CD58P19256 AC024267.1-201ENST00000582320 895 ntBASIC17.37■□□□□ 0.37
CD58P19256 MIR4321-201ENST00000592276 80 ntBASIC17.37■□□□□ 0.37
CD58P19256 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.37■□□□□ 0.37
CD58P19256 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 LINC00628-201ENST00000628516 1289 ntBASIC17.37■□□□□ 0.37
CD58P19256 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.37■□□□□ 0.37
CD58P19256 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.37■□□□□ 0.37
CD58P19256 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.37■□□□□ 0.37
CD58P19256 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms