Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRAFP15056 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
BRAFP15056 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
BRAFP15056 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRAFP15056 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BRAFP15056 AC087163.2-201ENST00000457299 853 ntBASIC16.71■□□□□ 0.27
BRAFP15056 POU5F1P6-201ENST00000466990 990 ntBASIC16.71■□□□□ 0.27
BRAFP15056 SLC25A6P2-201ENST00000497974 877 ntBASIC16.71■□□□□ 0.27
BRAFP15056 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.71■□□□□ 0.27
BRAFP15056 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.71■□□□□ 0.27
BRAFP15056 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.71■□□□□ 0.27
BRAFP15056 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRAFP15056 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.71■□□□□ 0.27
BRAFP15056 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRAFP15056 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.71■□□□□ 0.27
BRAFP15056 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRAFP15056 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRAFP15056 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.71■□□□□ 0.27
BRAFP15056 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRAFP15056 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.71■□□□□ 0.27
BRAFP15056 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRAFP15056 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRAFP15056 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.71■□□□□ 0.26
BRAFP15056 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.71■□□□□ 0.26
BRAFP15056 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
BRAFP15056 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
BRAFP15056 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.7■□□□□ 0.26
BRAFP15056 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 KRT8P39-201ENST00000396270 1433 ntBASIC16.7■□□□□ 0.26
BRAFP15056 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRAFP15056 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BRAFP15056 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.7■□□□□ 0.26
BRAFP15056 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.69■□□□□ 0.26
BRAFP15056 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
BRAFP15056 PCGF3-213ENST00000620529 1899 ntBASIC16.69■□□□□ 0.26
BRAFP15056 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
BRAFP15056 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.69■□□□□ 0.26
BRAFP15056 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.69■□□□□ 0.26
BRAFP15056 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.69■□□□□ 0.26
BRAFP15056 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 TOP3BP1-201ENST00000420768 1380 ntBASIC16.69■□□□□ 0.26
BRAFP15056 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BRAFP15056 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.69■□□□□ 0.26
BRAFP15056 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.69■□□□□ 0.26
BRAFP15056 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.69■□□□□ 0.26
BRAFP15056 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.69■□□□□ 0.26
BRAFP15056 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.69■□□□□ 0.26
BRAFP15056 AC018845.2-201ENST00000568326 409 ntBASIC16.69■□□□□ 0.26
BRAFP15056 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.69■□□□□ 0.26
BRAFP15056 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.69■□□□□ 0.26
BRAFP15056 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
BRAFP15056 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRAFP15056 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms