Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 NME2P1-201ENST00000426182 414 ntBASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 AL512361.1-201ENST00000554200 418 ntBASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 TP53TG3HP-202ENST00000569755 579 ntBASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 AL033527.5-202ENST00000641632 1098 ntBASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 AL391825.1-201ENST00000457671 1364 ntBASIC15.24■□□□□ 0.03
RAB40ALP0C0E4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 AC007541.1-201ENST00000570282 1469 ntBASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 DFFBP1-201ENST00000433250 979 ntBASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 RN7SL692P-201ENST00000464677 288 ntBASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 SDHAP3-202ENST00000515467 728 ntBASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 AL132655.2-201ENST00000596276 594 ntBASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 MIR6069-201ENST00000620069 79 ntBASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 U82695.1-201ENST00000635752 1889 ntBASIC15.23■□□□□ 0.03
RAB40ALP0C0E4 AC005915.1-201ENST00000624912 2018 ntBASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 AC087499.6-201ENST00000411576 835 ntBASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 AC114501.2-201ENST00000439631 535 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms