Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RETP07949 AC004945.1-201ENST00000416738 983 ntBASIC16.3■□□□□ 0.2
RETP07949 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.3■□□□□ 0.2
RETP07949 BNIP3P42-201ENST00000454982 569 ntBASIC16.3■□□□□ 0.2
RETP07949 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.3■□□□□ 0.2
RETP07949 SPDYE18-201ENST00000510091 1050 ntBASIC16.3■□□□□ 0.2
RETP07949 RNA5SP410-201ENST00000516285 106 ntBASIC16.3■□□□□ 0.2
RETP07949 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.3■□□□□ 0.2
RETP07949 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.3■□□□□ 0.2
RETP07949 AC015936.2-201ENST00000593177 259 ntBASIC16.3■□□□□ 0.2
RETP07949 BNIP3P29-201ENST00000598302 571 ntBASIC16.3■□□□□ 0.2
RETP07949 AC011447.5-201ENST00000616168 564 ntBASIC16.3■□□□□ 0.2
RETP07949 GPR182-203ENST00000622922 591 ntBASIC16.3■□□□□ 0.2
RETP07949 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.3■□□□□ 0.2
RETP07949 AL109936.8-201ENST00000641772 604 ntBASIC16.3■□□□□ 0.2
RETP07949 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RETP07949 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RETP07949 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.3■□□□□ 0.2
RETP07949 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RETP07949 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
RETP07949 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.29■□□□□ 0.2
RETP07949 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.29■□□□□ 0.2
RETP07949 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.29■□□□□ 0.2
RETP07949 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.29■□□□□ 0.2
RETP07949 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.29■□□□□ 0.2
RETP07949 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RETP07949 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RETP07949 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.29■□□□□ 0.2
RETP07949 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.29■□□□□ 0.2
RETP07949 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.29■□□□□ 0.2
RETP07949 TMEM261P1-201ENST00000604899 340 ntBASIC16.29■□□□□ 0.2
RETP07949 AC093726.1-201ENST00000608064 963 ntBASIC16.29■□□□□ 0.2
RETP07949 MIR6869-201ENST00000619434 62 ntBASIC16.29■□□□□ 0.2
RETP07949 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.29■□□□□ 0.2
RETP07949 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.29■□□□□ 0.2
RETP07949 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.29■□□□□ 0.2
RETP07949 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RETP07949 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RETP07949 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RETP07949 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RETP07949 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RETP07949 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.28■□□□□ 0.2
RETP07949 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RETP07949 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.28■□□□□ 0.2
RETP07949 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RETP07949 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.28■□□□□ 0.2
RETP07949 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
RETP07949 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.28■□□□□ 0.2
RETP07949 KRT43P-201ENST00000434019 910 ntBASIC16.28■□□□□ 0.2
RETP07949 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.28■□□□□ 0.2
RETP07949 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.28■□□□□ 0.2
RETP07949 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RETP07949 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.28■□□□□ 0.2
RETP07949 SDHAP3-202ENST00000515467 728 ntBASIC16.28■□□□□ 0.2
RETP07949 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RETP07949 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.28■□□□□ 0.2
RETP07949 MIR4492-201ENST00000581627 80 ntBASIC16.28■□□□□ 0.2
RETP07949 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.28■□□□□ 0.2
RETP07949 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RETP07949 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.28■□□□□ 0.2
RETP07949 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 AC006449.5-201ENST00000610658 2098 ntBASIC16.28■□□□□ 0.2
RETP07949 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RETP07949 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RETP07949 OR6D1P-203ENST00000641209 4860 ntBASIC16.28■□□□□ 0.2
RETP07949 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RETP07949 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RETP07949 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms