Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 RBM17P1-201ENST00000453646 1190 ntBASIC12.86□□□□□ -0.35
IFNA1P01562 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 KRT18P6-201ENST00000555540 1265 ntBASIC12.86□□□□□ -0.35
IFNA1P01562 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.86□□□□□ -0.35
IFNA1P01562 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.86□□□□□ -0.35
IFNA1P01562 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 AC113410.3-201ENST00000623366 203 ntBASIC12.86□□□□□ -0.35
IFNA1P01562 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.86□□□□□ -0.35
IFNA1P01562 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.85□□□□□ -0.35
IFNA1P01562 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
IFNA1P01562 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
IFNA1P01562 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.85□□□□□ -0.35
IFNA1P01562 AC079602.3-201ENST00000623931 403 ntBASIC12.85□□□□□ -0.35
IFNA1P01562 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms