Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.22□□□□□ -0.45
LTAP01374 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LTAP01374 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LTAP01374 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 RCN1P1-201ENST00000400413 996 ntBASIC12.22□□□□□ -0.45
LTAP01374 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
LTAP01374 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 NUS1P2-201ENST00000417358 873 ntBASIC12.22□□□□□ -0.45
LTAP01374 AC106795.1-205ENST00000512851 1056 ntBASIC12.22□□□□□ -0.45
LTAP01374 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.22□□□□□ -0.45
LTAP01374 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 AL591684.3-201ENST00000605187 298 ntBASIC12.22□□□□□ -0.45
LTAP01374 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.22□□□□□ -0.45
LTAP01374 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.22□□□□□ -0.45
LTAP01374 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.22□□□□□ -0.45
LTAP01374 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.22□□□□□ -0.45
LTAP01374 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.22□□□□□ -0.45
LTAP01374 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LTAP01374 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.22□□□□□ -0.45
LTAP01374 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LTAP01374 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.21□□□□□ -0.45
LTAP01374 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.21□□□□□ -0.45
LTAP01374 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LTAP01374 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LTAP01374 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LTAP01374 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LTAP01374 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LTAP01374 SNX18-202ENST00000343017 3140 ntBASIC12.21□□□□□ -0.45
LTAP01374 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.21□□□□□ -0.45
LTAP01374 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LTAP01374 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LTAP01374 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 AC126755.1-201ENST00000525846 6405 ntBASIC12.21□□□□□ -0.45
LTAP01374 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
LTAP01374 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LTAP01374 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LTAP01374 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.21□□□□□ -0.45
LTAP01374 DUX4L26-201ENST00000489078 1255 ntBASIC12.21□□□□□ -0.45
LTAP01374 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.21□□□□□ -0.45
LTAP01374 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.21□□□□□ -0.45
LTAP01374 AC012615.1-201ENST00000565797 1299 ntBASIC12.21□□□□□ -0.45
LTAP01374 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LTAP01374 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.21□□□□□ -0.45
LTAP01374 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.21□□□□□ -0.45
LTAP01374 C18orf15-201ENST00000623680 2534 ntBASIC12.21□□□□□ -0.45
LTAP01374 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LTAP01374 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LTAP01374 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms