Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.87■□□□□ 0.13
PEX1O43933 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.87■□□□□ 0.13
PEX1O43933 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 AC007967.2-201ENST00000432613 625 ntBASIC15.87■□□□□ 0.13
PEX1O43933 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.87■□□□□ 0.13
PEX1O43933 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 RNA5SP416-201ENST00000516838 111 ntBASIC15.87■□□□□ 0.13
PEX1O43933 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.87■□□□□ 0.13
PEX1O43933 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
PEX1O43933 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.87■□□□□ 0.13
PEX1O43933 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PEX1O43933 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 AC112504.1-201ENST00000623415 1841 ntBASIC15.87■□□□□ 0.13
PEX1O43933 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.87■□□□□ 0.13
PEX1O43933 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.86■□□□□ 0.13
PEX1O43933 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.86■□□□□ 0.13
PEX1O43933 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.86■□□□□ 0.13
PEX1O43933 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.86■□□□□ 0.13
PEX1O43933 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 BX842568.4-201ENST00000421222 227 ntBASIC15.86■□□□□ 0.13
PEX1O43933 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 PGAM5P1-201ENST00000518923 814 ntBASIC15.86■□□□□ 0.13
PEX1O43933 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.86■□□□□ 0.13
PEX1O43933 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PEX1O43933 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PEX1O43933 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PEX1O43933 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.85■□□□□ 0.13
PEX1O43933 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PEX1O43933 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PEX1O43933 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PEX1O43933 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PEX1O43933 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
PEX1O43933 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PEX1O43933 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PEX1O43933 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.85■□□□□ 0.13
PEX1O43933 AC006486.2-201ENST00000624246 2199 ntBASIC15.85■□□□□ 0.13
PEX1O43933 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PEX1O43933 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PEX1O43933 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.85■□□□□ 0.13
PEX1O43933 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.85■□□□□ 0.13
PEX1O43933 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PEX1O43933 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PEX1O43933 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.85■□□□□ 0.13
PEX1O43933 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PEX1O43933 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms