Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 C18orf15-201ENST00000623680 2534 ntBASIC16.47■□□□□ 0.23
RIPK2O43353 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RIPK2O43353 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.46■□□□□ 0.23
RIPK2O43353 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.46■□□□□ 0.23
RIPK2O43353 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 LINC01101-201ENST00000622953 1884 ntBASIC16.46■□□□□ 0.23
RIPK2O43353 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.46■□□□□ 0.23
RIPK2O43353 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RIPK2O43353 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.46■□□□□ 0.23
RIPK2O43353 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RIPK2O43353 CICP23-201ENST00000605013 2741 ntBASIC16.46■□□□□ 0.23
RIPK2O43353 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.46■□□□□ 0.23
RIPK2O43353 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 AC073621.1-201ENST00000392730 636 ntBASIC16.46■□□□□ 0.23
RIPK2O43353 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.46■□□□□ 0.23
RIPK2O43353 KRT18P27-201ENST00000427733 1299 ntBASIC16.46■□□□□ 0.23
RIPK2O43353 AC245100.5-201ENST00000452108 331 ntBASIC16.46■□□□□ 0.23
RIPK2O43353 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.46■□□□□ 0.23
RIPK2O43353 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.46■□□□□ 0.23
RIPK2O43353 AC087388.1-201ENST00000571370 1112 ntBASIC16.46■□□□□ 0.23
RIPK2O43353 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.46■□□□□ 0.23
RIPK2O43353 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.46■□□□□ 0.23
RIPK2O43353 AC107918.4-202ENST00000641623 219 ntBASIC16.46■□□□□ 0.23
RIPK2O43353 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.46■□□□□ 0.23
RIPK2O43353 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
RIPK2O43353 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.46■□□□□ 0.23
RIPK2O43353 SNX18-202ENST00000343017 3140 ntBASIC16.46■□□□□ 0.23
RIPK2O43353 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.46■□□□□ 0.23
RIPK2O43353 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RIPK2O43353 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RIPK2O43353 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
RIPK2O43353 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RIPK2O43353 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.45■□□□□ 0.22
RIPK2O43353 SCARNA2-201ENST00000458748 420 ntBASIC16.45■□□□□ 0.22
RIPK2O43353 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 AC021087.4-201ENST00000563761 564 ntBASIC16.45■□□□□ 0.22
RIPK2O43353 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 MIR3909-201ENST00000579518 119 ntBASIC16.45■□□□□ 0.22
RIPK2O43353 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
RIPK2O43353 AC008667.4-201ENST00000607370 168 ntBASIC16.45■□□□□ 0.22
RIPK2O43353 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.45■□□□□ 0.22
RIPK2O43353 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
RIPK2O43353 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RIPK2O43353 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIPK2O43353 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.45■□□□□ 0.22
RIPK2O43353 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RIPK2O43353 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.45■□□□□ 0.22
RIPK2O43353 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms