Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 AC012640.2-201ENST00000561606 901 ntBASIC15.13■□□□□ 0.01
ARHGEF9O43307 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 AC025062.2-201ENST00000605477 670 ntBASIC15.13■□□□□ 0.01
ARHGEF9O43307 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF9O43307 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
ARHGEF9O43307 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 DNAJB3-202ENST00000449667 1266 ntBASIC15.12■□□□□ 0.01
ARHGEF9O43307 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 AC005593.1-201ENST00000624894 515 ntBASIC15.12■□□□□ 0.01
ARHGEF9O43307 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF9O43307 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF9O43307 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms