Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CAPN9O14815 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.15■□□□□ 0.34
CAPN9O14815 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.15■□□□□ 0.34
CAPN9O14815 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CAPN9O14815 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.15■□□□□ 0.34
CAPN9O14815 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
CAPN9O14815 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CAPN9O14815 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CAPN9O14815 AL627223.1-201ENST00000416693 442 ntBASIC17.15■□□□□ 0.34
CAPN9O14815 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.15■□□□□ 0.34
CAPN9O14815 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.15■□□□□ 0.34
CAPN9O14815 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CAPN9O14815 AC023141.5-201ENST00000458585 616 ntBASIC17.15■□□□□ 0.34
CAPN9O14815 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.15■□□□□ 0.34
CAPN9O14815 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
CAPN9O14815 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CAPN9O14815 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.15■□□□□ 0.34
CAPN9O14815 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CAPN9O14815 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CAPN9O14815 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.15■□□□□ 0.34
CAPN9O14815 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CAPN9O14815 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN9O14815 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CAPN9O14815 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.15■□□□□ 0.34
CAPN9O14815 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CAPN9O14815 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CAPN9O14815 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CAPN9O14815 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN9O14815 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.14■□□□□ 0.33
CAPN9O14815 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.14■□□□□ 0.33
CAPN9O14815 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 MIR346-201ENST00000362234 95 ntBASIC17.14■□□□□ 0.33
CAPN9O14815 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 SLC25A39P2-201ENST00000537614 270 ntBASIC17.14■□□□□ 0.33
CAPN9O14815 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CAPN9O14815 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
CAPN9O14815 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN9O14815 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN9O14815 SPTSSB-204ENST00000617024 1292 ntBASIC17.14■□□□□ 0.33
CAPN9O14815 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 AC092850.2-201ENST00000623821 2697 ntBASIC17.14■□□□□ 0.33
CAPN9O14815 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CAPN9O14815 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN9O14815 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN9O14815 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CAPN9O14815 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN9O14815 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN9O14815 TSPY26P-202ENST00000565928 3884 ntBASIC17.14■□□□□ 0.33
CAPN9O14815 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN9O14815 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN9O14815 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN9O14815 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CAPN9O14815 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CAPN9O14815 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN9O14815 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CAPN9O14815 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
CAPN9O14815 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN9O14815 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CAPN9O14815 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CAPN9O14815 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN9O14815 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN9O14815 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN9O14815 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms