Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AC135586.1-201ENST00000539323 574 ntBASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 MIR6069-201ENST00000620069 79 ntBASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AC004840.1-201ENST00000636359 365 ntBASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AC046158.3-201ENST00000624947 2558 ntBASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 PIN1P1-201ENST00000412108 996 ntBASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AC245100.5-201ENST00000452108 331 ntBASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 ZNF890P-202ENST00000530367 1156 ntBASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AC044860.1-202ENST00000559481 777 ntBASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AC009053.2-201ENST00000563701 2365 ntBASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 BTBD7P1-201ENST00000447253 1453 ntBASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC00588Q9Y4M8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC00588Q9Y4M8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms