Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 ACKR1-201ENST00000368121 1240 ntBASIC21.72■■□□□ 1.07
PHF8Q9UPP1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 C2orf27AP3-201ENST00000434123 579 ntBASIC21.72■■□□□ 1.07
PHF8Q9UPP1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 AC026410.3-201ENST00000514280 936 ntBASIC21.72■■□□□ 1.07
PHF8Q9UPP1 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 RHOQP1-201ENST00000555758 579 ntBASIC21.72■■□□□ 1.07
PHF8Q9UPP1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 AL354718.3-201ENST00000616414 581 ntBASIC21.72■■□□□ 1.07
PHF8Q9UPP1 CR382287.1-201ENST00000623954 586 ntBASIC21.72■■□□□ 1.07
PHF8Q9UPP1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 AC078925.2-201ENST00000624013 1973 ntBASIC21.72■■□□□ 1.07
PHF8Q9UPP1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PHF8Q9UPP1 RNF216P1-203ENST00000404404 2427 ntBASIC21.71■■□□□ 1.07
PHF8Q9UPP1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC21.71■■□□□ 1.07
PHF8Q9UPP1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.71■■□□□ 1.07
PHF8Q9UPP1 HTR7P1-202ENST00000624664 4411 ntBASIC21.71■■□□□ 1.07
PHF8Q9UPP1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
PHF8Q9UPP1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.7■■□□□ 1.07
PHF8Q9UPP1 AL121723.1-201ENST00000445194 1519 ntBASIC21.7■■□□□ 1.07
PHF8Q9UPP1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PHF8Q9UPP1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PHF8Q9UPP1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 AC025279.2-201ENST00000569730 653 ntBASIC21.7■■□□□ 1.06
PHF8Q9UPP1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PHF8Q9UPP1 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms