Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 AC091951.1-201ENST00000512854 2465 ntBASIC13.18□□□□□ -0.3
NKX6-2Q9C056 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 RBM17P1-201ENST00000453646 1190 ntBASIC13.18□□□□□ -0.3
NKX6-2Q9C056 AP003071.4-201ENST00000562276 1284 ntBASIC13.18□□□□□ -0.3
NKX6-2Q9C056 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 AL671710.1-201ENST00000610245 2349 ntBASIC13.18□□□□□ -0.3
NKX6-2Q9C056 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 Z82170.1-201ENST00000625081 3192 ntBASIC13.18□□□□□ -0.3
NKX6-2Q9C056 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 MROH4P-201ENST00000431302 1578 ntBASIC13.17□□□□□ -0.3
NKX6-2Q9C056 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 FRMD8P1-201ENST00000440433 1524 ntBASIC13.17□□□□□ -0.3
NKX6-2Q9C056 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms