Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC46A1Q96NT5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 AC092658.1-201ENST00000505836 891 ntBASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 AP005482.1-201ENST00000563722 1273 ntBASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 AC093726.1-201ENST00000608064 963 ntBASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 AL109936.8-201ENST00000641772 604 ntBASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 GPAA1P2-202ENST00000606848 1787 ntBASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 GGT4P-201ENST00000623672 1708 ntBASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.43■□□□□ 0.06
SLC46A1Q96NT5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 GGT3P-204ENST00000453783 1664 ntBASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 AC007389.4-201ENST00000454674 793 ntBASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 MIR4259-201ENST00000584466 101 ntBASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 CROCCP1-201ENST00000426910 5675 ntBASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC46A1Q96NT5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms