Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
TRIM11Q96F44 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.14■□□□□ 0.34
TRIM11Q96F44 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM11Q96F44 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 RN7SL589P-201ENST00000481268 310 ntBASIC17.14■□□□□ 0.33
TRIM11Q96F44 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 AC092865.6-201ENST00000642101 219 ntBASIC17.14■□□□□ 0.33
TRIM11Q96F44 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM11Q96F44 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRIM11Q96F44 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 AL355306.1-201ENST00000415580 579 ntBASIC17.13■□□□□ 0.33
TRIM11Q96F44 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM11Q96F44 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM11Q96F44 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 AC132872.4-202ENST00000622924 2756 ntBASIC17.12■□□□□ 0.33
TRIM11Q96F44 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms