Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RNF183Q96D59 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RNF183Q96D59 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.09□□□□□ -0.47
RNF183Q96D59 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RNF183Q96D59 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.09□□□□□ -0.47
RNF183Q96D59 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 FAM86GP-201ENST00000448322 971 ntBASIC12.09□□□□□ -0.47
RNF183Q96D59 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.09□□□□□ -0.47
RNF183Q96D59 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.09□□□□□ -0.47
RNF183Q96D59 AC067863.1-201ENST00000494933 530 ntBASIC12.09□□□□□ -0.47
RNF183Q96D59 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 AL512356.2-201ENST00000546955 174 ntBASIC12.09□□□□□ -0.47
RNF183Q96D59 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.09□□□□□ -0.47
RNF183Q96D59 AC027307.2-201ENST00000591252 911 ntBASIC12.09□□□□□ -0.47
RNF183Q96D59 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 AC084121.4-201ENST00000641598 221 ntBASIC12.09□□□□□ -0.47
RNF183Q96D59 AF228730.8-201ENST00000642140 221 ntBASIC12.09□□□□□ -0.47
RNF183Q96D59 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RNF183Q96D59 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.09□□□□□ -0.47
RNF183Q96D59 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 PCDHA14-201ENST00000506751 2298 ntBASIC12.09□□□□□ -0.47
RNF183Q96D59 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.09□□□□□ -0.47
RNF183Q96D59 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
RNF183Q96D59 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF183Q96D59 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
RNF183Q96D59 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RNF183Q96D59 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
RNF183Q96D59 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
RNF183Q96D59 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
RNF183Q96D59 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RNF183Q96D59 LINC00895-201ENST00000629028 1637 ntBASIC12.08□□□□□ -0.48
RNF183Q96D59 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 PRAL-201ENST00000624952 3286 ntBASIC12.08□□□□□ -0.48
RNF183Q96D59 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RNF183Q96D59 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.08□□□□□ -0.48
RNF183Q96D59 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 FAM58DP-201ENST00000428076 619 ntBASIC12.08□□□□□ -0.48
RNF183Q96D59 RBPMS2P1-201ENST00000437762 623 ntBASIC12.08□□□□□ -0.48
RNF183Q96D59 CNN2P2-201ENST00000443536 909 ntBASIC12.08□□□□□ -0.48
RNF183Q96D59 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.08□□□□□ -0.48
RNF183Q96D59 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 CNN2P3-201ENST00000450201 906 ntBASIC12.08□□□□□ -0.48
RNF183Q96D59 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF183Q96D59 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.08□□□□□ -0.48
RNF183Q96D59 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF183Q96D59 AC015911.4-201ENST00000588022 1070 ntBASIC12.08□□□□□ -0.48
RNF183Q96D59 AL136317.3-201ENST00000618497 906 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms