Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.35■□□□□ 0.05
TM9SF4Q92544 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF4Q92544 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF4Q92544 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TM9SF4Q92544 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.35■□□□□ 0.05
TM9SF4Q92544 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TM9SF4Q92544 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF4Q92544 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF4Q92544 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF4Q92544 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF4Q92544 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.35■□□□□ 0.05
TM9SF4Q92544 AC063926.2-201ENST00000623766 1308 ntBASIC15.35■□□□□ 0.05
TM9SF4Q92544 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.35■□□□□ 0.05
TM9SF4Q92544 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.35■□□□□ 0.05
TM9SF4Q92544 HLA-A-202ENST00000376806 1854 ntBASIC15.35■□□□□ 0.05
TM9SF4Q92544 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF4Q92544 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.35■□□□□ 0.05
TM9SF4Q92544 AC016027.1-202ENST00000607927 1699 ntBASIC15.35■□□□□ 0.05
TM9SF4Q92544 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF4Q92544 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 KRT8P49-201ENST00000604166 1432 ntBASIC15.34■□□□□ 0.05
TM9SF4Q92544 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 AL358472.5-202ENST00000641448 1267 ntBASIC15.34■□□□□ 0.05
TM9SF4Q92544 AF228730.6-201ENST00000641497 218 ntBASIC15.34■□□□□ 0.05
TM9SF4Q92544 AC084121.3-201ENST00000641716 218 ntBASIC15.34■□□□□ 0.05
TM9SF4Q92544 AC105233.6-201ENST00000642093 218 ntBASIC15.34■□□□□ 0.05
TM9SF4Q92544 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 SLC22A20-204ENST00000530038 1673 ntBASIC15.34■□□□□ 0.05
TM9SF4Q92544 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.34■□□□□ 0.05
TM9SF4Q92544 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF4Q92544 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TM9SF4Q92544 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.33■□□□□ 0.05
TM9SF4Q92544 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TM9SF4Q92544 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TM9SF4Q92544 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TM9SF4Q92544 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.33■□□□□ 0.05
TM9SF4Q92544 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.33■□□□□ 0.05
TM9SF4Q92544 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TM9SF4Q92544 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TM9SF4Q92544 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TM9SF4Q92544 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TM9SF4Q92544 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TM9SF4Q92544 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TM9SF4Q92544 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TM9SF4Q92544 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 AC005034.1-201ENST00000426657 489 ntBASIC15.33■□□□□ 0.04
TM9SF4Q92544 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 AC241585.1-201ENST00000433527 519 ntBASIC15.33■□□□□ 0.04
TM9SF4Q92544 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TM9SF4Q92544 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 AC008761.3-201ENST00000624803 892 ntBASIC15.33■□□□□ 0.04
TM9SF4Q92544 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.33■□□□□ 0.04
TM9SF4Q92544 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms