Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 AC105020.1-201ENST00000435356 2205 ntBASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 AL589987.1-201ENST00000453380 819 ntBASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 AL365330.1-201ENST00000607459 531 ntBASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 WFDC1-204ENST00000613603 549 ntBASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 MIR8072-201ENST00000614241 80 ntBASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SYNPOQ8N3V7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SYNPOQ8N3V7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SYNPOQ8N3V7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 AC098850.1-201ENST00000419919 790 ntBASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 KRT223P-202ENST00000449164 1292 ntBASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 AC092658.1-201ENST00000505836 891 ntBASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 AC025048.3-201ENST00000590609 569 ntBASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 AC005702.4-201ENST00000618393 416 ntBASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 AC005915.1-201ENST00000624912 2018 ntBASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPOQ8N3V7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms