Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AC060834.1-201ENST00000443027 2032 ntBASIC13.39□□□□□ -0.27
CSMD2Q7Z408 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 AL391256.1-201ENST00000443260 1855 ntBASIC13.38□□□□□ -0.27
CSMD2Q7Z408 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 BAATP1-201ENST00000412284 1225 ntBASIC13.38□□□□□ -0.27
CSMD2Q7Z408 TOMM22P5-201ENST00000416399 439 ntBASIC13.38□□□□□ -0.27
CSMD2Q7Z408 POM121L10P-201ENST00000436994 1285 ntBASIC13.38□□□□□ -0.27
CSMD2Q7Z408 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD2Q7Z408 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 VDAC1P7-201ENST00000462417 847 ntBASIC13.37□□□□□ -0.27
CSMD2Q7Z408 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 AC024681.1-201ENST00000521917 487 ntBASIC13.37□□□□□ -0.27
CSMD2Q7Z408 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 AL645939.5-201ENST00000606834 243 ntBASIC13.37□□□□□ -0.27
CSMD2Q7Z408 AC011491.1-203ENST00000637688 543 ntBASIC13.37□□□□□ -0.27
CSMD2Q7Z408 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 PCDH8P1-201ENST00000428983 2773 ntBASIC13.37□□□□□ -0.27
CSMD2Q7Z408 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms