Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC8.82□□□□□ -1
LCA10Q71F78 MBLAC2-202ENST00000514906 1936 ntBASIC8.82□□□□□ -1
LCA10Q71F78 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
LCA10Q71F78 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
LCA10Q71F78 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 LINC00167-201ENST00000530583 1419 ntBASIC8.81□□□□□ -1
LCA10Q71F78 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC8.81□□□□□ -1
LCA10Q71F78 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 GSN-215ENST00000545652 2428 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC8.81□□□□□ -1
LCA10Q71F78 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC8.81□□□□□ -1
LCA10Q71F78 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC8.81□□□□□ -1
LCA10Q71F78 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC8.81□□□□□ -1
LCA10Q71F78 DENND3-207ENST00000518347 850 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 DHDH-203ENST00000522614 776 ntTSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 FITM1-202ENST00000559294 800 ntBASIC8.81□□□□□ -1
LCA10Q71F78 MIR4785-201ENST00000585005 73 ntBASIC8.81□□□□□ -1
LCA10Q71F78 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 Z99916.2-201ENST00000604037 246 ntBASIC8.81□□□□□ -1
LCA10Q71F78 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC8.81□□□□□ -1
LCA10Q71F78 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC8.81□□□□□ -1
LCA10Q71F78 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC8.81□□□□□ -1
LCA10Q71F78 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 PBK-203ENST00000522944 1499 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
LCA10Q71F78 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC8.81□□□□□ -1
LCA10Q71F78 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC8.81□□□□□ -1
LCA10Q71F78 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC8.81□□□□□ -1
LCA10Q71F78 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC8.81□□□□□ -1
LCA10Q71F78 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LCA10Q71F78 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC8.8□□□□□ -1
LCA10Q71F78 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
LCA10Q71F78 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC8.8□□□□□ -1
LCA10Q71F78 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC8.8□□□□□ -1
LCA10Q71F78 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC8.8□□□□□ -1
LCA10Q71F78 MEX3B-202ENST00000558133 4333 ntBASIC8.8□□□□□ -1
LCA10Q71F78 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC8.8□□□□□ -1
LCA10Q71F78 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC8.8□□□□□ -1
LCA10Q71F78 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC8.8□□□□□ -1
LCA10Q71F78 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
LCA10Q71F78 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms