Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.04■□□□□ 0.32
RNF43Q68DV7 AC138649.4-201ENST00000612222 287 ntBASIC17.04■□□□□ 0.32
RNF43Q68DV7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 GAPDHP21-201ENST00000450301 1010 ntBASIC17.03■□□□□ 0.32
RNF43Q68DV7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 AL138918.1-201ENST00000568306 659 ntBASIC17.03■□□□□ 0.32
RNF43Q68DV7 RN7SL204P-201ENST00000582831 262 ntBASIC17.03■□□□□ 0.32
RNF43Q68DV7 AC027307.2-201ENST00000591252 911 ntBASIC17.03■□□□□ 0.32
RNF43Q68DV7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF43Q68DV7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RNF43Q68DV7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 AL512652.2-201ENST00000625156 1716 ntBASIC17.02■□□□□ 0.32
RNF43Q68DV7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 KRT18P32-201ENST00000424695 1287 ntBASIC17.02■□□□□ 0.32
RNF43Q68DV7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF43Q68DV7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF43Q68DV7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms