Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPGS2Q68CL5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPGS2Q68CL5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPGS2Q68CL5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPGS2Q68CL5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPGS2Q68CL5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPGS2Q68CL5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPGS2Q68CL5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 AC005052.1-201ENST00000625181 2492 ntBASIC16.81■□□□□ 0.28
TPGS2Q68CL5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 CLK3P2-201ENST00000427566 1453 ntBASIC16.81■□□□□ 0.28
TPGS2Q68CL5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 TTTY23B-201ENST00000442790 549 ntBASIC16.81■□□□□ 0.28
TPGS2Q68CL5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPGS2Q68CL5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 FLJ38576-201ENST00000623820 2459 ntBASIC16.8■□□□□ 0.28
TPGS2Q68CL5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 TOMM22P5-201ENST00000416399 439 ntBASIC16.8■□□□□ 0.28
TPGS2Q68CL5 AC074338.1-201ENST00000416825 156 ntBASIC16.8■□□□□ 0.28
TPGS2Q68CL5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 AC007389.4-201ENST00000454674 793 ntBASIC16.8■□□□□ 0.28
TPGS2Q68CL5 IGHV3-71-201ENST00000523324 359 ntBASIC16.8■□□□□ 0.28
TPGS2Q68CL5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 AL158212.4-201ENST00000624062 1286 ntBASIC16.8■□□□□ 0.28
TPGS2Q68CL5 AL033527.5-201ENST00000641382 801 ntBASIC16.8■□□□□ 0.28
TPGS2Q68CL5 AC022211.2-201ENST00000585075 2527 ntBASIC16.8■□□□□ 0.28
TPGS2Q68CL5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPGS2Q68CL5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.79■□□□□ 0.28
TPGS2Q68CL5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms