Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 LINC00982-205ENST00000420957 435 ntBASIC15.33■□□□□ 0.04
LPCAT4Q643R3 AL845331.1-201ENST00000424978 1190 ntBASIC15.33■□□□□ 0.04
LPCAT4Q643R3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.33■□□□□ 0.04
LPCAT4Q643R3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 MPDU1-223ENST00000582151 728 ntBASIC15.33■□□□□ 0.04
LPCAT4Q643R3 MIR4497-201ENST00000583208 89 ntBASIC15.33■□□□□ 0.04
LPCAT4Q643R3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 AL590326.2-201ENST00000625139 305 ntBASIC15.33■□□□□ 0.04
LPCAT4Q643R3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.33■□□□□ 0.04
LPCAT4Q643R3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 AL353801.3-201ENST00000609898 542 ntBASIC15.32■□□□□ 0.04
LPCAT4Q643R3 TMEM191A-211ENST00000637163 1067 ntBASIC15.32■□□□□ 0.04
LPCAT4Q643R3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 LINC01230-201ENST00000625222 3017 ntBASIC15.32■□□□□ 0.04
LPCAT4Q643R3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPCAT4Q643R3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 AJ011931.1-201ENST00000618749 2492 ntBASIC15.31■□□□□ 0.04
LPCAT4Q643R3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 GUSBP12-201ENST00000513727 720 ntBASIC15.31■□□□□ 0.04
LPCAT4Q643R3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms