Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 KRT18P31-201ENST00000506277 1292 ntBASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 SART3-203ENST00000546611 1184 ntBASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 LINC01711-201ENST00000598340 967 ntBASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH2D4BQ5SQS7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 AL353732.1-201ENST00000569618 1459 ntBASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 AP005117.1-202ENST00000581724 1908 ntBASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 PRAL-201ENST00000624952 3286 ntBASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 LINC02447-202ENST00000501888 2146 ntBASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 CDC14C-201ENST00000428251 1719 ntBASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 PCDHA3-202ENST00000532566 4594 ntBASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
SH2D4BQ5SQS7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 AC107918.2-201ENST00000530817 355 ntBASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SH2D4BQ5SQS7 AC010654.1-201ENST00000615722 808 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms