Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 RPS8P6-201ENST00000426177 609 ntBASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 SNHG9-202ENST00000564014 471 ntBASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 AL691403.2-201ENST00000618460 490 ntBASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 AL691432.1-201ENST00000596308 1422 ntBASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.31
PTPN20Q4JDL3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 BANF1P1-201ENST00000553684 263 ntBASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 AP005117.1-202ENST00000581724 1908 ntBASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN20Q4JDL3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 CCDC74BP1-201ENST00000508880 1123 ntBASIC17■□□□□ 0.31
PTPN20Q4JDL3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 AC018529.1-201ENST00000613063 361 ntBASIC17■□□□□ 0.31
PTPN20Q4JDL3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms