Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.46□□□□□ -0.57
CKS1BP61024 AL390719.2-201ENST00000606993 987 ntBASIC11.46□□□□□ -0.57
CKS1BP61024 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS1BP61024 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS1BP61024 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.46□□□□□ -0.57
CKS1BP61024 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CKS1BP61024 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.46□□□□□ -0.57
CKS1BP61024 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.46□□□□□ -0.57
CKS1BP61024 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CKS1BP61024 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CKS1BP61024 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.46□□□□□ -0.58
CKS1BP61024 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.46□□□□□ -0.58
CKS1BP61024 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS1BP61024 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS1BP61024 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS1BP61024 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
CKS1BP61024 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CKS1BP61024 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS1BP61024 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC11.46□□□□□ -0.58
CKS1BP61024 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.46□□□□□ -0.58
CKS1BP61024 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
CKS1BP61024 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS1BP61024 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS1BP61024 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.46□□□□□ -0.58
CKS1BP61024 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS1BP61024 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.46□□□□□ -0.58
CKS1BP61024 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS1BP61024 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.45□□□□□ -0.58
CKS1BP61024 AC117489.1-201ENST00000625169 3217 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 LINC00552-201ENST00000625151 2579 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
CKS1BP61024 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 DGCR9-201ENST00000609630 2415 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 TUBB8P12-201ENST00000308911 1335 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 TUBB7P-202ENST00000428444 1305 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 TUBB8P7-204ENST00000567960 1332 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.45□□□□□ -0.58
CKS1BP61024 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 FAM220CP-201ENST00000395253 831 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 SLC25A1P3-201ENST00000395415 828 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CKS1BP61024 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.45□□□□□ -0.58
CKS1BP61024 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 YBX1P2-201ENST00000489612 999 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.45□□□□□ -0.58
CKS1BP61024 STK19B-204ENST00000512515 211 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.45□□□□□ -0.58
CKS1BP61024 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.45□□□□□ -0.58
CKS1BP61024 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 AC139887.4-201ENST00000607877 719 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 AC019129.2-201ENST00000609837 1235 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.45□□□□□ -0.58
CKS1BP61024 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.45□□□□□ -0.58
CKS1BP61024 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
CKS1BP61024 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CKS1BP61024 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.45□□□□□ -0.58
CKS1BP61024 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 MIR193BHG-211ENST00000641433 5365 ntBASIC11.45□□□□□ -0.58
CKS1BP61024 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS1BP61024 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.44□□□□□ -0.58
CKS1BP61024 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms