Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.54□□□□□ -0.08
CAV3P56539 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.54□□□□□ -0.08
CAV3P56539 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CAV3P56539 SAPCD2P3-201ENST00000455031 850 ntBASIC14.54□□□□□ -0.08
CAV3P56539 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.54□□□□□ -0.08
CAV3P56539 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.54□□□□□ -0.08
CAV3P56539 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.54□□□□□ -0.08
CAV3P56539 KRT126P-201ENST00000549467 1181 ntBASIC14.54□□□□□ -0.08
CAV3P56539 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CAV3P56539 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.54□□□□□ -0.08
CAV3P56539 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.54□□□□□ -0.08
CAV3P56539 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.54□□□□□ -0.08
CAV3P56539 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.54□□□□□ -0.08
CAV3P56539 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CAV3P56539 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.54□□□□□ -0.08
CAV3P56539 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.54□□□□□ -0.08
CAV3P56539 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAV3P56539 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CAV3P56539 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.53□□□□□ -0.08
CAV3P56539 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CAV3P56539 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
CAV3P56539 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.53□□□□□ -0.08
CAV3P56539 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 AC004817.3-201ENST00000602957 2129 ntBASIC14.53□□□□□ -0.08
CAV3P56539 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.53□□□□□ -0.08
CAV3P56539 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.53□□□□□ -0.08
CAV3P56539 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.53□□□□□ -0.08
CAV3P56539 AC243591.1-201ENST00000452967 1364 ntBASIC14.53□□□□□ -0.08
CAV3P56539 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.53□□□□□ -0.08
CAV3P56539 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.53□□□□□ -0.08
CAV3P56539 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.53□□□□□ -0.08
CAV3P56539 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.53□□□□□ -0.08
CAV3P56539 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.53□□□□□ -0.08
CAV3P56539 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.53□□□□□ -0.08
CAV3P56539 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.53□□□□□ -0.08
CAV3P56539 AL691432.3-201ENST00000621860 400 ntBASIC14.53□□□□□ -0.08
CAV3P56539 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CAV3P56539 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CAV3P56539 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CAV3P56539 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.53□□□□□ -0.08
CAV3P56539 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.53□□□□□ -0.08
CAV3P56539 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAV3P56539 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CAV3P56539 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAV3P56539 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.52□□□□□ -0.08
CAV3P56539 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAV3P56539 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAV3P56539 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
CAV3P56539 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.52□□□□□ -0.08
CAV3P56539 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.52□□□□□ -0.08
CAV3P56539 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAV3P56539 SIGLEC16-201ENST00000599858 1437 ntBASIC14.52□□□□□ -0.08
CAV3P56539 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.52□□□□□ -0.08
CAV3P56539 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CAV3P56539 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
CAV3P56539 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAV3P56539 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAV3P56539 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.52□□□□□ -0.08
CAV3P56539 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAV3P56539 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAV3P56539 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAV3P56539 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAV3P56539 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAV3P56539 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAV3P56539 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.52□□□□□ -0.09
CAV3P56539 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAV3P56539 AP001269.4-201ENST00000609611 512 ntBASIC14.52□□□□□ -0.09
CAV3P56539 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.52□□□□□ -0.09
CAV3P56539 AL355877.3-201ENST00000622820 899 ntBASIC14.52□□□□□ -0.09
CAV3P56539 AC073592.4-201ENST00000623827 446 ntBASIC14.52□□□□□ -0.09
CAV3P56539 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.52□□□□□ -0.09
CAV3P56539 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAV3P56539 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms