Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
GFRA1P56159 AL662844.4-201ENST00000606367 2838 ntBASIC14.46□□□□□ -0.09
GFRA1P56159 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 MIR648-201ENST00000385046 94 ntBASIC14.46□□□□□ -0.09
GFRA1P56159 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.46□□□□□ -0.09
GFRA1P56159 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.46□□□□□ -0.09
GFRA1P56159 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.46□□□□□ -0.09
GFRA1P56159 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.46□□□□□ -0.09
GFRA1P56159 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.46□□□□□ -0.09
GFRA1P56159 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.46□□□□□ -0.09
GFRA1P56159 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.46□□□□□ -0.09
GFRA1P56159 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.46□□□□□ -0.09
GFRA1P56159 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.46□□□□□ -0.09
GFRA1P56159 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.46□□□□□ -0.09
GFRA1P56159 LINC02560-201ENST00000596379 459 ntBASIC14.46□□□□□ -0.09
GFRA1P56159 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 LINC02084-201ENST00000606069 1096 ntBASIC14.46□□□□□ -0.09
GFRA1P56159 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 AC008761.3-201ENST00000624803 892 ntBASIC14.46□□□□□ -0.09
GFRA1P56159 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.46□□□□□ -0.09
GFRA1P56159 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.46□□□□□ -0.09
GFRA1P56159 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
GFRA1P56159 BNIP3P1-202ENST00000550043 1585 ntBASIC14.46□□□□□ -0.09
GFRA1P56159 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GFRA1P56159 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.46□□□□□ -0.1
GFRA1P56159 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GFRA1P56159 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GFRA1P56159 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
GFRA1P56159 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.45□□□□□ -0.1
GFRA1P56159 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.45□□□□□ -0.1
GFRA1P56159 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
GFRA1P56159 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.45□□□□□ -0.1
GFRA1P56159 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 KRT8P37-201ENST00000451609 1420 ntBASIC14.45□□□□□ -0.1
GFRA1P56159 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.45□□□□□ -0.1
GFRA1P56159 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.45□□□□□ -0.1
GFRA1P56159 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GFRA1P56159 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
GFRA1P56159 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.45□□□□□ -0.1
GFRA1P56159 AC009118.2-201ENST00000613275 655 ntBASIC14.45□□□□□ -0.1
GFRA1P56159 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.45□□□□□ -0.1
GFRA1P56159 AC004840.1-201ENST00000636359 365 ntBASIC14.45□□□□□ -0.1
GFRA1P56159 NFIC-211ENST00000641145 8399 ntBASIC14.45□□□□□ -0.1
GFRA1P56159 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
GFRA1P56159 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 AL596087.1-201ENST00000400979 1969 ntBASIC14.45□□□□□ -0.1
GFRA1P56159 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.45□□□□□ -0.1
GFRA1P56159 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.45□□□□□ -0.1
GFRA1P56159 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.45□□□□□ -0.1
GFRA1P56159 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GFRA1P56159 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
GFRA1P56159 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
GFRA1P56159 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
GFRA1P56159 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GFRA1P56159 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GFRA1P56159 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms