Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH13P55290 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH13P55290 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDH13P55290 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 AC016027.1-202ENST00000607927 1699 ntBASIC15.89■□□□□ 0.13
CDH13P55290 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
CDH13P55290 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH13P55290 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH13P55290 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH13P55290 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH13P55290 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH13P55290 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH13P55290 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH13P55290 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH13P55290 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDH13P55290 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 AC023141.13-201ENST00000604991 943 ntBASIC15.88■□□□□ 0.13
CDH13P55290 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH13P55290 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH13P55290 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH13P55290 AC013268.4-201ENST00000637413 2228 ntBASIC15.88■□□□□ 0.13
CDH13P55290 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDH13P55290 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH13P55290 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH13P55290 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CDH13P55290 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 AC092474.2-201ENST00000424288 719 ntBASIC15.87■□□□□ 0.13
CDH13P55290 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 AC009078.2-202ENST00000463353 338 ntBASIC15.87■□□□□ 0.13
CDH13P55290 KRT18P34-201ENST00000488218 1270 ntBASIC15.87■□□□□ 0.13
CDH13P55290 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 AC109635.5-201ENST00000533593 962 ntBASIC15.87■□□□□ 0.13
CDH13P55290 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 KRT126P-201ENST00000549467 1181 ntBASIC15.87■□□□□ 0.13
CDH13P55290 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.87■□□□□ 0.13
CDH13P55290 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH13P55290 AC018845.2-201ENST00000568326 409 ntBASIC15.87■□□□□ 0.13
CDH13P55290 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 Z83851.2-201ENST00000609564 659 ntBASIC15.87■□□□□ 0.13
CDH13P55290 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms