Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.95■□□□□ 0.14
GTF2A1P52655 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.95■□□□□ 0.14
GTF2A1P52655 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.95■□□□□ 0.14
GTF2A1P52655 KRT18P6-201ENST00000555540 1265 ntBASIC15.95■□□□□ 0.14
GTF2A1P52655 RARRES2P10-201ENST00000564312 460 ntBASIC15.95■□□□□ 0.14
GTF2A1P52655 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 AC083964.2-201ENST00000623988 2396 ntBASIC15.95■□□□□ 0.14
GTF2A1P52655 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 AMT-221ENST00000538581 2038 ntTSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
GTF2A1P52655 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GTF2A1P52655 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GTF2A1P52655 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.94■□□□□ 0.14
GTF2A1P52655 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
GTF2A1P52655 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
GTF2A1P52655 HOXB1-202ENST00000577092 1414 ntBASIC15.94■□□□□ 0.14
GTF2A1P52655 CDC14C-201ENST00000428251 1719 ntBASIC15.94■□□□□ 0.14
GTF2A1P52655 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
GTF2A1P52655 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC15.94■□□□□ 0.14
GTF2A1P52655 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 LINC02447-202ENST00000501888 2146 ntBASIC15.94■□□□□ 0.14
GTF2A1P52655 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
GTF2A1P52655 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.94■□□□□ 0.14
GTF2A1P52655 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.94■□□□□ 0.14
GTF2A1P52655 AC128676.1-201ENST00000454392 318 ntBASIC15.94■□□□□ 0.14
GTF2A1P52655 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.94■□□□□ 0.14
GTF2A1P52655 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.94■□□□□ 0.14
GTF2A1P52655 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.94■□□□□ 0.14
GTF2A1P52655 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.94■□□□□ 0.14
GTF2A1P52655 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
GTF2A1P52655 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
GTF2A1P52655 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
GTF2A1P52655 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
GTF2A1P52655 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.94■□□□□ 0.14
GTF2A1P52655 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GTF2A1P52655 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
GTF2A1P52655 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms