Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.76□□□□□ -0.21
VAMP1P23763 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 GPAA1P2-202ENST00000606848 1787 ntBASIC13.76□□□□□ -0.21
VAMP1P23763 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.76□□□□□ -0.21
VAMP1P23763 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 KRT8P39-201ENST00000396270 1433 ntBASIC13.76□□□□□ -0.21
VAMP1P23763 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 AL020989.1-201ENST00000422979 469 ntBASIC13.76□□□□□ -0.21
VAMP1P23763 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
VAMP1P23763 RN7SL606P-201ENST00000472779 293 ntBASIC13.76□□□□□ -0.21
VAMP1P23763 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.76□□□□□ -0.21
VAMP1P23763 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.76□□□□□ -0.21
VAMP1P23763 AL353801.3-201ENST00000609898 542 ntBASIC13.76□□□□□ -0.21
VAMP1P23763 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 AL109954.1-202ENST00000564051 2148 ntBASIC13.76□□□□□ -0.21
VAMP1P23763 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAMP1P23763 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VAMP1P23763 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.76□□□□□ -0.21
VAMP1P23763 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.75□□□□□ -0.21
VAMP1P23763 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.75□□□□□ -0.21
VAMP1P23763 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.75□□□□□ -0.21
VAMP1P23763 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.75□□□□□ -0.21
VAMP1P23763 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.75□□□□□ -0.21
VAMP1P23763 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.75□□□□□ -0.21
VAMP1P23763 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.75□□□□□ -0.21
VAMP1P23763 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.75□□□□□ -0.21
VAMP1P23763 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.75□□□□□ -0.21
VAMP1P23763 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.75□□□□□ -0.21
VAMP1P23763 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
VAMP1P23763 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.75□□□□□ -0.21
VAMP1P23763 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.75□□□□□ -0.21
VAMP1P23763 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.75□□□□□ -0.21
VAMP1P23763 TERC-201ENST00000602385 541 ntBASIC13.75□□□□□ -0.21
VAMP1P23763 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
VAMP1P23763 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.75□□□□□ -0.21
VAMP1P23763 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VAMP1P23763 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VAMP1P23763 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
VAMP1P23763 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
VAMP1P23763 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.75□□□□□ -0.21
VAMP1P23763 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms