Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.09■□□□□ 0.17
NELFEP18615 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.09■□□□□ 0.17
NELFEP18615 HLA-J-203ENST00000494367 1087 ntBASIC16.09■□□□□ 0.17
NELFEP18615 AC079140.1-201ENST00000508039 487 ntBASIC16.09■□□□□ 0.17
NELFEP18615 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFEP18615 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.09■□□□□ 0.17
NELFEP18615 AL135744.1-201ENST00000565098 629 ntBASIC16.09■□□□□ 0.17
NELFEP18615 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
NELFEP18615 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.09■□□□□ 0.17
NELFEP18615 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFEP18615 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFEP18615 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
NELFEP18615 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFEP18615 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFEP18615 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.09■□□□□ 0.17
NELFEP18615 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
NELFEP18615 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NELFEP18615 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NELFEP18615 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NELFEP18615 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
NELFEP18615 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
NELFEP18615 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NELFEP18615 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 RNU1-129P-201ENST00000384064 167 ntBASIC16.08■□□□□ 0.16
NELFEP18615 PMS2P4-201ENST00000412466 1052 ntBASIC16.08■□□□□ 0.16
NELFEP18615 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NELFEP18615 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
NELFEP18615 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.08■□□□□ 0.16
NELFEP18615 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.08■□□□□ 0.16
NELFEP18615 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.08■□□□□ 0.16
NELFEP18615 AC243562.1-201ENST00000560672 389 ntBASIC16.08■□□□□ 0.16
NELFEP18615 AC004449.1-201ENST00000564240 433 ntBASIC16.08■□□□□ 0.16
NELFEP18615 MIR3909-201ENST00000579518 119 ntBASIC16.08■□□□□ 0.16
NELFEP18615 U1.21-201ENST00000580816 167 ntBASIC16.08■□□□□ 0.16
NELFEP18615 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.08■□□□□ 0.16
NELFEP18615 AC093028.1-201ENST00000622998 982 ntBASIC16.08■□□□□ 0.16
NELFEP18615 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.08■□□□□ 0.16
NELFEP18615 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
NELFEP18615 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.08■□□□□ 0.16
NELFEP18615 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NELFEP18615 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.08■□□□□ 0.16
NELFEP18615 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.08■□□□□ 0.16
NELFEP18615 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.08■□□□□ 0.16
NELFEP18615 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFEP18615 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.07■□□□□ 0.16
NELFEP18615 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.07■□□□□ 0.16
NELFEP18615 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 AC005237.2-201ENST00000434368 219 ntBASIC16.07■□□□□ 0.16
NELFEP18615 AL592309.1-201ENST00000443127 649 ntBASIC16.07■□□□□ 0.16
NELFEP18615 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.07■□□□□ 0.16
NELFEP18615 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 AC124947.2-201ENST00000547118 1133 ntBASIC16.07■□□□□ 0.16
NELFEP18615 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
NELFEP18615 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.07■□□□□ 0.16
NELFEP18615 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms