Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
DEFA4P12838 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
DEFA4P12838 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
DEFA4P12838 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.26□□□□□ -0.29
DEFA4P12838 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.26□□□□□ -0.29
DEFA4P12838 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.26□□□□□ -0.29
DEFA4P12838 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
DEFA4P12838 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
DEFA4P12838 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.26□□□□□ -0.29
DEFA4P12838 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 EMBP1-201ENST00000458200 901 ntBASIC13.26□□□□□ -0.29
DEFA4P12838 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.26□□□□□ -0.29
DEFA4P12838 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.26□□□□□ -0.29
DEFA4P12838 AL121912.1-201ENST00000603683 238 ntBASIC13.26□□□□□ -0.29
DEFA4P12838 AC013467.2-201ENST00000605472 835 ntBASIC13.26□□□□□ -0.29
DEFA4P12838 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.26□□□□□ -0.29
DEFA4P12838 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.26□□□□□ -0.29
DEFA4P12838 AC002310.6-201ENST00000624451 1377 ntBASIC13.26□□□□□ -0.29
DEFA4P12838 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
DEFA4P12838 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
DEFA4P12838 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
DEFA4P12838 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.26□□□□□ -0.29
DEFA4P12838 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.26□□□□□ -0.29
DEFA4P12838 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.25□□□□□ -0.29
DEFA4P12838 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
DEFA4P12838 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.25□□□□□ -0.29
DEFA4P12838 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.25□□□□□ -0.29
DEFA4P12838 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 AC131009.4-201ENST00000624048 1740 ntBASIC13.25□□□□□ -0.29
DEFA4P12838 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.25□□□□□ -0.29
DEFA4P12838 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.25□□□□□ -0.29
DEFA4P12838 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
DEFA4P12838 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.25□□□□□ -0.29
DEFA4P12838 AC129492.6-201ENST00000611383 1305 ntBASIC13.25□□□□□ -0.29
DEFA4P12838 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.25□□□□□ -0.29
DEFA4P12838 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
DEFA4P12838 UNC93B7-201ENST00000509439 705 ntBASIC13.25□□□□□ -0.29
DEFA4P12838 AC105339.3-201ENST00000560043 636 ntBASIC13.25□□□□□ -0.29
DEFA4P12838 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.25□□□□□ -0.29
DEFA4P12838 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 AC091167.2-201ENST00000579581 588 ntBASIC13.25□□□□□ -0.29
DEFA4P12838 MPDU1-223ENST00000582151 728 ntBASIC13.25□□□□□ -0.29
DEFA4P12838 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.25□□□□□ -0.29
DEFA4P12838 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 AC008735.5-201ENST00000623544 497 ntBASIC13.25□□□□□ -0.29
DEFA4P12838 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
DEFA4P12838 AL139011.1-202ENST00000642063 584 ntBASIC13.25□□□□□ -0.29
DEFA4P12838 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.25□□□□□ -0.29
DEFA4P12838 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
DEFA4P12838 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
DEFA4P12838 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
DEFA4P12838 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 AP003680.1-201ENST00000598970 3660 ntBASIC13.25□□□□□ -0.29
DEFA4P12838 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DEFA4P12838 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
DEFA4P12838 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms