Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA6Q9Y5G7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGA6Q9Y5G7 THA1P-201ENST00000590384 1145 ntBASIC22.68■■□□□ 1.22
PCDHGA6Q9Y5G7 AC131212.1-201ENST00000613771 668 ntBASIC22.68■■□□□ 1.22
PCDHGA6Q9Y5G7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA6Q9Y5G7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA6Q9Y5G7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA6Q9Y5G7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHGA6Q9Y5G7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.67■■□□□ 1.22
PCDHGA6Q9Y5G7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
PCDHGA6Q9Y5G7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGA6Q9Y5G7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 AP004609.3-201ENST00000610705 1884 ntBASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA6Q9Y5G7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 AL356441.2-201ENST00000443009 864 ntBASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 AC239859.2-201ENST00000444165 318 ntBASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA6Q9Y5G7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA6Q9Y5G7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA6Q9Y5G7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA6Q9Y5G7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA6Q9Y5G7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGA6Q9Y5G7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGA6Q9Y5G7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGA6Q9Y5G7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.64■■□□□ 1.21
PCDHGA6Q9Y5G7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHGA6Q9Y5G7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHGA6Q9Y5G7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGA6Q9Y5G7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGA6Q9Y5G7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA6Q9Y5G7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA6Q9Y5G7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHGA6Q9Y5G7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA6Q9Y5G7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA6Q9Y5G7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA6Q9Y5G7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHGA6Q9Y5G7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA6Q9Y5G7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA6Q9Y5G7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGA6Q9Y5G7 AC142472.1-201ENST00000612013 1741 ntBASIC22.62■■□□□ 1.21
PCDHGA6Q9Y5G7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGA6Q9Y5G7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
PCDHGA6Q9Y5G7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
PCDHGA6Q9Y5G7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA6Q9Y5G7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.61■■□□□ 1.21
PCDHGA6Q9Y5G7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.61■■□□□ 1.21
PCDHGA6Q9Y5G7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PCDHGA6Q9Y5G7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDHGA6Q9Y5G7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA6Q9Y5G7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PCDHGA6Q9Y5G7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA6Q9Y5G7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA6Q9Y5G7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHGA6Q9Y5G7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
PCDHGA6Q9Y5G7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHGA6Q9Y5G7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA6Q9Y5G7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA6Q9Y5G7 KRT18P24-201ENST00000344739 1156 ntBASIC22.58■■□□□ 1.21
PCDHGA6Q9Y5G7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA6Q9Y5G7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA6Q9Y5G7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA6Q9Y5G7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA6Q9Y5G7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA6Q9Y5G7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA6Q9Y5G7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
PCDHGA6Q9Y5G7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA6Q9Y5G7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA6Q9Y5G7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA6Q9Y5G7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA6Q9Y5G7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA6Q9Y5G7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA6Q9Y5G7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA6Q9Y5G7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms