Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGC4Q9Y5F7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGC4Q9Y5F7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGC4Q9Y5F7 AC103834.1-201ENST00000520383 144 ntBASIC23.89■■□□□ 1.41
PCDHGC4Q9Y5F7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC4Q9Y5F7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC4Q9Y5F7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC4Q9Y5F7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC4Q9Y5F7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHGC4Q9Y5F7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC4Q9Y5F7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC4Q9Y5F7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC4Q9Y5F7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC4Q9Y5F7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHGC4Q9Y5F7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGC4Q9Y5F7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCDHGC4Q9Y5F7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PCDHGC4Q9Y5F7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
PCDHGC4Q9Y5F7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGC4Q9Y5F7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGC4Q9Y5F7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PCDHGC4Q9Y5F7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGC4Q9Y5F7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHGC4Q9Y5F7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGC4Q9Y5F7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGC4Q9Y5F7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PCDHGC4Q9Y5F7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.86■■□□□ 1.41
PCDHGC4Q9Y5F7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGC4Q9Y5F7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGC4Q9Y5F7 AC020928.2-201ENST00000588717 2197 ntBASIC23.86■■□□□ 1.41
PCDHGC4Q9Y5F7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGC4Q9Y5F7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.85■■□□□ 1.41
PCDHGC4Q9Y5F7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGC4Q9Y5F7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDHGC4Q9Y5F7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
PCDHGC4Q9Y5F7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDHGC4Q9Y5F7 RARRES2P1-201ENST00000474487 481 ntBASIC23.84■■□□□ 1.41
PCDHGC4Q9Y5F7 MIR4508-201ENST00000584178 70 ntBASIC23.84■■□□□ 1.41
PCDHGC4Q9Y5F7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGC4Q9Y5F7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHGC4Q9Y5F7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
PCDHGC4Q9Y5F7 AL592295.1-201ENST00000400984 884 ntBASIC23.83■■□□□ 1.41
PCDHGC4Q9Y5F7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGC4Q9Y5F7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGC4Q9Y5F7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHGC4Q9Y5F7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHGC4Q9Y5F7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 YBX1P4-201ENST00000392794 808 ntBASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PCDHGC4Q9Y5F7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHGC4Q9Y5F7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGC4Q9Y5F7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHGC4Q9Y5F7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGC4Q9Y5F7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGC4Q9Y5F7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PCDHGC4Q9Y5F7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGC4Q9Y5F7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PCDHGC4Q9Y5F7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGC4Q9Y5F7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGC4Q9Y5F7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGC4Q9Y5F7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGC4Q9Y5F7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHGC4Q9Y5F7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGC4Q9Y5F7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGC4Q9Y5F7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGC4Q9Y5F7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGC4Q9Y5F7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGC4Q9Y5F7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHGC4Q9Y5F7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGC4Q9Y5F7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGC4Q9Y5F7 AC022616.5-201ENST00000518796 181 ntBASIC23.79■■□□□ 1.4
PCDHGC4Q9Y5F7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGC4Q9Y5F7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGC4Q9Y5F7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGC4Q9Y5F7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.78■■□□□ 1.4
PCDHGC4Q9Y5F7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHGC4Q9Y5F7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGC4Q9Y5F7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.78■■□□□ 1.4
PCDHGC4Q9Y5F7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PCDHGC4Q9Y5F7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGC4Q9Y5F7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGC4Q9Y5F7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHGC4Q9Y5F7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGC4Q9Y5F7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 AC022211.4-201ENST00000625094 2161 ntBASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms