Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB11Q9Y5F2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB11Q9Y5F2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB11Q9Y5F2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB11Q9Y5F2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHB11Q9Y5F2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.12■■□□□ 1.29
PCDHB11Q9Y5F2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB11Q9Y5F2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
PCDHB11Q9Y5F2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PCDHB11Q9Y5F2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB11Q9Y5F2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB11Q9Y5F2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB11Q9Y5F2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB11Q9Y5F2 RPS2P7-201ENST00000447334 885 ntBASIC23.1■■□□□ 1.29
PCDHB11Q9Y5F2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.1■■□□□ 1.29
PCDHB11Q9Y5F2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PCDHB11Q9Y5F2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB11Q9Y5F2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB11Q9Y5F2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB11Q9Y5F2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB11Q9Y5F2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PCDHB11Q9Y5F2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PCDHB11Q9Y5F2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB11Q9Y5F2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHB11Q9Y5F2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB11Q9Y5F2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB11Q9Y5F2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB11Q9Y5F2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHB11Q9Y5F2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
PCDHB11Q9Y5F2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB11Q9Y5F2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB11Q9Y5F2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHB11Q9Y5F2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB11Q9Y5F2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHB11Q9Y5F2 AL356441.2-201ENST00000443009 864 ntBASIC23.07■■□□□ 1.28
PCDHB11Q9Y5F2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PCDHB11Q9Y5F2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB11Q9Y5F2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHB11Q9Y5F2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PCDHB11Q9Y5F2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB11Q9Y5F2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHB11Q9Y5F2 AC239859.2-201ENST00000444165 318 ntBASIC23.06■■□□□ 1.28
PCDHB11Q9Y5F2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB11Q9Y5F2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB11Q9Y5F2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
PCDHB11Q9Y5F2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB11Q9Y5F2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB11Q9Y5F2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB11Q9Y5F2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB11Q9Y5F2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHB11Q9Y5F2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB11Q9Y5F2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB11Q9Y5F2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PCDHB11Q9Y5F2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PCDHB11Q9Y5F2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHB11Q9Y5F2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB11Q9Y5F2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB11Q9Y5F2 AC097639.1-201ENST00000565519 1891 ntBASIC23.03■■□□□ 1.28
PCDHB11Q9Y5F2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHB11Q9Y5F2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHB11Q9Y5F2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDHB11Q9Y5F2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB11Q9Y5F2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 LONRF2P2-201ENST00000439212 571 ntBASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 Z92544.1-202ENST00000571933 1220 ntBASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PCDHB11Q9Y5F2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB11Q9Y5F2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB11Q9Y5F2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB11Q9Y5F2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB11Q9Y5F2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.01■■□□□ 1.27
PCDHB11Q9Y5F2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB11Q9Y5F2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB11Q9Y5F2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHB11Q9Y5F2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB11Q9Y5F2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23■■□□□ 1.27
PCDHB11Q9Y5F2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDHB11Q9Y5F2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB11Q9Y5F2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB11Q9Y5F2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB11Q9Y5F2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB11Q9Y5F2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDHB11Q9Y5F2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms