Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF7Q9UBF6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF7Q9UBF6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF7Q9UBF6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF7Q9UBF6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF7Q9UBF6 PVT1_1.1-201ENST00000615125 194 ntBASIC19.91■□□□□ 0.78
RNF7Q9UBF6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF7Q9UBF6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF7Q9UBF6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF7Q9UBF6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF7Q9UBF6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF7Q9UBF6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNF7Q9UBF6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF7Q9UBF6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF7Q9UBF6 AC022616.5-201ENST00000518796 181 ntBASIC19.9■□□□□ 0.78
RNF7Q9UBF6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF7Q9UBF6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF7Q9UBF6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF7Q9UBF6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF7Q9UBF6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF7Q9UBF6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF7Q9UBF6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RNF7Q9UBF6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF7Q9UBF6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF7Q9UBF6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF7Q9UBF6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF7Q9UBF6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF7Q9UBF6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RNF7Q9UBF6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF7Q9UBF6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF7Q9UBF6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF7Q9UBF6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF7Q9UBF6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNF7Q9UBF6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 SLC6A10P-202ENST00000431994 2058 ntBASIC19.87■□□□□ 0.77
RNF7Q9UBF6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF7Q9UBF6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF7Q9UBF6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF7Q9UBF6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF7Q9UBF6 YBX1P4-201ENST00000392794 808 ntBASIC19.86■□□□□ 0.77
RNF7Q9UBF6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF7Q9UBF6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF7Q9UBF6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF7Q9UBF6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF7Q9UBF6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF7Q9UBF6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF7Q9UBF6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF7Q9UBF6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF7Q9UBF6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF7Q9UBF6 MIR4508-201ENST00000584178 70 ntBASIC19.85■□□□□ 0.77
RNF7Q9UBF6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF7Q9UBF6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF7Q9UBF6 KRT8P33-201ENST00000508125 1423 ntBASIC19.85■□□□□ 0.77
RNF7Q9UBF6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF7Q9UBF6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF7Q9UBF6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF7Q9UBF6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF7Q9UBF6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF7Q9UBF6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF7Q9UBF6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF7Q9UBF6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF7Q9UBF6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF7Q9UBF6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF7Q9UBF6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF7Q9UBF6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RNF7Q9UBF6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF7Q9UBF6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF7Q9UBF6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF7Q9UBF6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF7Q9UBF6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF7Q9UBF6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF7Q9UBF6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RNF7Q9UBF6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF7Q9UBF6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF7Q9UBF6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF7Q9UBF6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF7Q9UBF6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.82■□□□□ 0.76
RNF7Q9UBF6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF7Q9UBF6 AC020928.2-201ENST00000588717 2197 ntBASIC19.82■□□□□ 0.76
RNF7Q9UBF6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF7Q9UBF6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF7Q9UBF6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF7Q9UBF6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RNF7Q9UBF6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RNF7Q9UBF6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF7Q9UBF6 AC103834.1-201ENST00000520383 144 ntBASIC19.81■□□□□ 0.76
RNF7Q9UBF6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RNF7Q9UBF6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF7Q9UBF6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF7Q9UBF6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RNF7Q9UBF6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms