Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP4-1Q9BYQ7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP4-1Q9BYQ7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC12.47□□□□□ -0.41
KRTAP4-1Q9BYQ7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP4-1Q9BYQ7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP4-1Q9BYQ7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP4-1Q9BYQ7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP4-1Q9BYQ7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP4-1Q9BYQ7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
KRTAP4-1Q9BYQ7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC12.46□□□□□ -0.41
KRTAP4-1Q9BYQ7 AL356740.2-201ENST00000601559 647 ntBASIC12.46□□□□□ -0.41
KRTAP4-1Q9BYQ7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC12.46□□□□□ -0.41
KRTAP4-1Q9BYQ7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
KRTAP4-1Q9BYQ7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
KRTAP4-1Q9BYQ7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
KRTAP4-1Q9BYQ7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
KRTAP4-1Q9BYQ7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP4-1Q9BYQ7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP4-1Q9BYQ7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
KRTAP4-1Q9BYQ7 CD72-202ENST00000378430 585 ntTSL 3 BASIC12.44□□□□□ -0.42
KRTAP4-1Q9BYQ7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC12.44□□□□□ -0.42
KRTAP4-1Q9BYQ7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP4-1Q9BYQ7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP4-1Q9BYQ7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC12.44□□□□□ -0.42
KRTAP4-1Q9BYQ7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP4-1Q9BYQ7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 AK3-203ENST00000447596 705 ntTSL 2 BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 AC011551.1-201ENST00000614101 683 ntBASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC12.43□□□□□ -0.42
KRTAP4-1Q9BYQ7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 AL031432.3-201ENST00000607698 485 ntBASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP4-1Q9BYQ7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP4-1Q9BYQ7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP4-1Q9BYQ7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP4-1Q9BYQ7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP4-1Q9BYQ7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC12.41□□□□□ -0.42
KRTAP4-1Q9BYQ7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP4-1Q9BYQ7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
KRTAP4-1Q9BYQ7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC12.41□□□□□ -0.42
KRTAP4-1Q9BYQ7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP4-1Q9BYQ7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP4-1Q9BYQ7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP4-1Q9BYQ7 AC026271.2-201ENST00000428091 497 ntBASIC12.4□□□□□ -0.42
KRTAP4-1Q9BYQ7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC12.4□□□□□ -0.42
KRTAP4-1Q9BYQ7 AC133561.4-201ENST00000566112 224 ntBASIC12.4□□□□□ -0.42
KRTAP4-1Q9BYQ7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
KRTAP4-1Q9BYQ7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
KRTAP4-1Q9BYQ7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP4-1Q9BYQ7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP4-1Q9BYQ7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC12.4□□□□□ -0.43
KRTAP4-1Q9BYQ7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
KRTAP4-1Q9BYQ7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 PBX2P1-201ENST00000493219 1291 ntBASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 RARRES2P6-201ENST00000567333 442 ntBASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 AC106739.1-201ENST00000617035 715 ntBASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
KRTAP4-1Q9BYQ7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms