Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
ABCA3Q99758 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
ABCA3Q99758 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC32.17■■■□□ 2.74
ABCA3Q99758 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
ABCA3Q99758 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
ABCA3Q99758 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
ABCA3Q99758 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
ABCA3Q99758 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
ABCA3Q99758 PBX2P1-201ENST00000493219 1291 ntBASIC32.17■■■□□ 2.74
ABCA3Q99758 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.16■■■□□ 2.74
ABCA3Q99758 MIR5787-201ENST00000611784 55 ntBASIC32.16■■■□□ 2.74
ABCA3Q99758 AC105265.2-201ENST00000467189 838 ntBASIC32.15■■■□□ 2.74
ABCA3Q99758 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC32.15■■■□□ 2.74
ABCA3Q99758 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC32.15■■■□□ 2.74
ABCA3Q99758 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC32.14■■■□□ 2.74
ABCA3Q99758 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC32.14■■■□□ 2.74
ABCA3Q99758 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
ABCA3Q99758 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
ABCA3Q99758 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
ABCA3Q99758 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC32.13■■■□□ 2.73
ABCA3Q99758 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
ABCA3Q99758 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
ABCA3Q99758 SNAI3-AS1-204ENST00000567997 2048 ntBASIC32.12■■■□□ 2.73
ABCA3Q99758 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
ABCA3Q99758 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.12■■■□□ 2.73
ABCA3Q99758 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ABCA3Q99758 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC32.12■■■□□ 2.73
ABCA3Q99758 AL136162.1-201ENST00000607711 1078 ntBASIC32.12■■■□□ 2.73
ABCA3Q99758 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA3Q99758 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
ABCA3Q99758 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA3Q99758 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA3Q99758 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC32.11■■■□□ 2.73
ABCA3Q99758 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
ABCA3Q99758 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
ABCA3Q99758 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC32.1■■■□□ 2.73
ABCA3Q99758 ABCB10P1-201ENST00000614297 2181 ntBASIC32.1■■■□□ 2.73
ABCA3Q99758 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
ABCA3Q99758 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ABCA3Q99758 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA3Q99758 AC024257.2-201ENST00000549699 147 ntBASIC32.09■■■□□ 2.73
ABCA3Q99758 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
ABCA3Q99758 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
ABCA3Q99758 UNC93B3-201ENST00000308076 687 ntBASIC32.08■■■□□ 2.73
ABCA3Q99758 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC32.08■■■□□ 2.73
ABCA3Q99758 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA3Q99758 AP001330.3-201ENST00000520123 633 ntBASIC32.07■■■□□ 2.72
ABCA3Q99758 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA3Q99758 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA3Q99758 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA3Q99758 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC32.07■■■□□ 2.72
ABCA3Q99758 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA3Q99758 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
ABCA3Q99758 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
ABCA3Q99758 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC32.06■■■□□ 2.72
ABCA3Q99758 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
ABCA3Q99758 EDA-201ENST00000338901 1233 ntBASIC32.06■■■□□ 2.72
ABCA3Q99758 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
ABCA3Q99758 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC32.06■■■□□ 2.72
ABCA3Q99758 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
ABCA3Q99758 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC32.06■■■□□ 2.72
ABCA3Q99758 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC32.05■■■□□ 2.72
ABCA3Q99758 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ABCA3Q99758 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ABCA3Q99758 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC32.04■■■□□ 2.72
ABCA3Q99758 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC32.04■■■□□ 2.72
ABCA3Q99758 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ABCA3Q99758 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ABCA3Q99758 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC32.03■■■□□ 2.72
ABCA3Q99758 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ABCA3Q99758 AF213884.3-201ENST00000563833 479 ntBASIC32.03■■■□□ 2.72
ABCA3Q99758 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ABCA3Q99758 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ABCA3Q99758 ANKRD20A6P-201ENST00000618763 204 ntBASIC32.02■■■□□ 2.72
ABCA3Q99758 MIR939-201ENST00000401314 82 ntBASIC32.01■■■□□ 2.72
ABCA3Q99758 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ABCA3Q99758 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ABCA3Q99758 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
ABCA3Q99758 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC32■■■□□ 2.71
ABCA3Q99758 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
ABCA3Q99758 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.99■■■□□ 2.71
ABCA3Q99758 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
ABCA3Q99758 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
ABCA3Q99758 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.99■■■□□ 2.71
ABCA3Q99758 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ABCA3Q99758 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ABCA3Q99758 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.98■■■□□ 2.71
ABCA3Q99758 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ABCA3Q99758 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
ABCA3Q99758 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ABCA3Q99758 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
ABCA3Q99758 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
ABCA3Q99758 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
ABCA3Q99758 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.96■■■□□ 2.71
ABCA3Q99758 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
ABCA3Q99758 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.96■■■□□ 2.71
ABCA3Q99758 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.95■■■□□ 2.71
ABCA3Q99758 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.95■■■□□ 2.7
ABCA3Q99758 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.95■■■□□ 2.7
ABCA3Q99758 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms