Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDHCQ99643 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SDHCQ99643 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SDHCQ99643 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
SDHCQ99643 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDHCQ99643 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.51■□□□□ 0.87
SDHCQ99643 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHCQ99643 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHCQ99643 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHCQ99643 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDHCQ99643 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.5■□□□□ 0.87
SDHCQ99643 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.5■□□□□ 0.87
SDHCQ99643 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.5■□□□□ 0.87
SDHCQ99643 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHCQ99643 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.5■□□□□ 0.87
SDHCQ99643 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.5■□□□□ 0.87
SDHCQ99643 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.49■□□□□ 0.87
SDHCQ99643 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.49■□□□□ 0.87
SDHCQ99643 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDHCQ99643 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDHCQ99643 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDHCQ99643 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
SDHCQ99643 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.48■□□□□ 0.87
SDHCQ99643 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDHCQ99643 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.48■□□□□ 0.87
SDHCQ99643 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDHCQ99643 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SDHCQ99643 AC007375.3-201ENST00000600936 2314 ntBASIC20.48■□□□□ 0.87
SDHCQ99643 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SDHCQ99643 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.47■□□□□ 0.87
SDHCQ99643 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.47■□□□□ 0.87
SDHCQ99643 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDHCQ99643 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDHCQ99643 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDHCQ99643 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SDHCQ99643 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SDHCQ99643 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHCQ99643 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHCQ99643 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHCQ99643 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SDHCQ99643 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHCQ99643 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHCQ99643 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SDHCQ99643 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.45■□□□□ 0.86
SDHCQ99643 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SDHCQ99643 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHCQ99643 AC137767.1-201ENST00000602918 1920 ntBASIC20.45■□□□□ 0.86
SDHCQ99643 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SDHCQ99643 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
SDHCQ99643 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHCQ99643 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.45■□□□□ 0.86
SDHCQ99643 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHCQ99643 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.44■□□□□ 0.86
SDHCQ99643 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SDHCQ99643 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDHCQ99643 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.44■□□□□ 0.86
SDHCQ99643 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDHCQ99643 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDHCQ99643 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SDHCQ99643 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SDHCQ99643 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SDHCQ99643 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SDHCQ99643 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SDHCQ99643 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHCQ99643 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SDHCQ99643 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.43■□□□□ 0.86
SDHCQ99643 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.43■□□□□ 0.86
SDHCQ99643 AL391121.1-201ENST00000607967 1349 ntBASIC20.43■□□□□ 0.86
SDHCQ99643 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SDHCQ99643 LINC00526-201ENST00000581067 1875 ntBASIC20.43■□□□□ 0.86
SDHCQ99643 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.43■□□□□ 0.86
SDHCQ99643 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SDHCQ99643 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SDHCQ99643 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SDHCQ99643 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SDHCQ99643 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SDHCQ99643 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHCQ99643 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHCQ99643 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHCQ99643 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.42■□□□□ 0.86
SDHCQ99643 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.42■□□□□ 0.86
SDHCQ99643 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHCQ99643 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.42■□□□□ 0.86
SDHCQ99643 AC110285.7-201ENST00000624417 1536 ntBASIC20.42■□□□□ 0.86
SDHCQ99643 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SDHCQ99643 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.41■□□□□ 0.86
SDHCQ99643 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.41■□□□□ 0.86
SDHCQ99643 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHCQ99643 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SDHCQ99643 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SDHCQ99643 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SDHCQ99643 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SDHCQ99643 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SDHCQ99643 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHCQ99643 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHCQ99643 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.4■□□□□ 0.86
SDHCQ99643 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SDHCQ99643 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHCQ99643 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SDHCQ99643 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms