Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
MUC4Q99102 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.2■□□□□ 0.34
MUC4Q99102 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.2■□□□□ 0.34
MUC4Q99102 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MUC4Q99102 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MUC4Q99102 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
MUC4Q99102 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MUC4Q99102 LINC00543-201ENST00000567234 1845 ntBASIC17.2■□□□□ 0.34
MUC4Q99102 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MUC4Q99102 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MUC4Q99102 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MUC4Q99102 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MUC4Q99102 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MUC4Q99102 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MUC4Q99102 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MUC4Q99102 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MUC4Q99102 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MUC4Q99102 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MUC4Q99102 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
MUC4Q99102 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MUC4Q99102 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MUC4Q99102 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.19■□□□□ 0.34
MUC4Q99102 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MUC4Q99102 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MUC4Q99102 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MUC4Q99102 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MUC4Q99102 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.18■□□□□ 0.34
MUC4Q99102 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MUC4Q99102 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.18■□□□□ 0.34
MUC4Q99102 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MUC4Q99102 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
MUC4Q99102 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
MUC4Q99102 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MUC4Q99102 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MUC4Q99102 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
MUC4Q99102 RAP2CP1-202ENST00000605179 643 ntBASIC17.17■□□□□ 0.34
MUC4Q99102 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MUC4Q99102 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MUC4Q99102 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MUC4Q99102 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MUC4Q99102 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MUC4Q99102 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MUC4Q99102 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
MUC4Q99102 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.16■□□□□ 0.34
MUC4Q99102 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MUC4Q99102 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MUC4Q99102 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MUC4Q99102 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MUC4Q99102 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.16■□□□□ 0.34
MUC4Q99102 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.16■□□□□ 0.34
MUC4Q99102 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MUC4Q99102 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MUC4Q99102 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MUC4Q99102 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MUC4Q99102 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MUC4Q99102 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MUC4Q99102 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MUC4Q99102 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MUC4Q99102 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MUC4Q99102 ECEL1P2-201ENST00000461596 1295 ntBASIC17.15■□□□□ 0.34
MUC4Q99102 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MUC4Q99102 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MUC4Q99102 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MUC4Q99102 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
MUC4Q99102 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
MUC4Q99102 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
MUC4Q99102 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
MUC4Q99102 RNF126P1-201ENST00000567452 1320 ntBASIC17.14■□□□□ 0.33
MUC4Q99102 SMPD5-203ENST00000639008 1464 ntBASIC17.14■□□□□ 0.33
MUC4Q99102 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.14■□□□□ 0.33
MUC4Q99102 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MUC4Q99102 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
MUC4Q99102 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MUC4Q99102 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
MUC4Q99102 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
MUC4Q99102 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MUC4Q99102 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.14■□□□□ 0.33
MUC4Q99102 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.14■□□□□ 0.33
MUC4Q99102 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MUC4Q99102 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MUC4Q99102 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MUC4Q99102 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.13■□□□□ 0.33
MUC4Q99102 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.13■□□□□ 0.33
MUC4Q99102 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MUC4Q99102 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MUC4Q99102 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MUC4Q99102 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MUC4Q99102 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MUC4Q99102 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MUC4Q99102 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MUC4Q99102 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MUC4Q99102 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MUC4Q99102 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MUC4Q99102 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MUC4Q99102 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MUC4Q99102 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MUC4Q99102 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MUC4Q99102 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MUC4Q99102 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MUC4Q99102 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms