Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.4■■□□□ 1.34
PTCD3Q96EY7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.4■■□□□ 1.34
PTCD3Q96EY7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.4■■□□□ 1.34
PTCD3Q96EY7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCD3Q96EY7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.4■■□□□ 1.34
PTCD3Q96EY7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTCD3Q96EY7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.34
PTCD3Q96EY7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTCD3Q96EY7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTCD3Q96EY7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.39■■□□□ 1.33
PTCD3Q96EY7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PTCD3Q96EY7 LINC00543-201ENST00000567234 1845 ntBASIC23.38■■□□□ 1.33
PTCD3Q96EY7 SMPD5-203ENST00000639008 1464 ntBASIC23.38■■□□□ 1.33
PTCD3Q96EY7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCD3Q96EY7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCD3Q96EY7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PTCD3Q96EY7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD3Q96EY7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.36■■□□□ 1.33
PTCD3Q96EY7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD3Q96EY7 GPX1-201ENST00000419349 1106 ntBASIC23.36■■□□□ 1.33
PTCD3Q96EY7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCD3Q96EY7 MIR3960-201ENST00000583311 91 ntBASIC23.36■■□□□ 1.33
PTCD3Q96EY7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD3Q96EY7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD3Q96EY7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.35■■□□□ 1.33
PTCD3Q96EY7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.35■■□□□ 1.33
PTCD3Q96EY7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.35■■□□□ 1.33
PTCD3Q96EY7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.35■■□□□ 1.33
PTCD3Q96EY7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PTCD3Q96EY7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCD3Q96EY7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCD3Q96EY7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PTCD3Q96EY7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCD3Q96EY7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.33■■□□□ 1.33
PTCD3Q96EY7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PTCD3Q96EY7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD3Q96EY7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD3Q96EY7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.32■■□□□ 1.32
PTCD3Q96EY7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD3Q96EY7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.32■■□□□ 1.32
PTCD3Q96EY7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD3Q96EY7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD3Q96EY7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD3Q96EY7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD3Q96EY7 AP003733.4-201ENST00000623785 1697 ntBASIC23.32■■□□□ 1.32
PTCD3Q96EY7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCD3Q96EY7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.31■■□□□ 1.32
PTCD3Q96EY7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PTCD3Q96EY7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCD3Q96EY7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.31■■□□□ 1.32
PTCD3Q96EY7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCD3Q96EY7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PTCD3Q96EY7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTCD3Q96EY7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCD3Q96EY7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.3■■□□□ 1.32
PTCD3Q96EY7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCD3Q96EY7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCD3Q96EY7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.3■■□□□ 1.32
PTCD3Q96EY7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
PTCD3Q96EY7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCD3Q96EY7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PTCD3Q96EY7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PTCD3Q96EY7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCD3Q96EY7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.29■■□□□ 1.32
PTCD3Q96EY7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
PTCD3Q96EY7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCD3Q96EY7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.28■■□□□ 1.32
PTCD3Q96EY7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCD3Q96EY7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCD3Q96EY7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCD3Q96EY7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCD3Q96EY7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCD3Q96EY7 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.28■■□□□ 1.32
PTCD3Q96EY7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.28■■□□□ 1.32
PTCD3Q96EY7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCD3Q96EY7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
PTCD3Q96EY7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCD3Q96EY7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.27■■□□□ 1.32
PTCD3Q96EY7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCD3Q96EY7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms