Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
APH1BQ8WW43 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.38■■□□□ 1.01
APH1BQ8WW43 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
APH1BQ8WW43 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
APH1BQ8WW43 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.38■■□□□ 1.01
APH1BQ8WW43 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
APH1BQ8WW43 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
APH1BQ8WW43 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
APH1BQ8WW43 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.37■■□□□ 1.01
APH1BQ8WW43 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.37■■□□□ 1.01
APH1BQ8WW43 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
APH1BQ8WW43 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APH1BQ8WW43 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
APH1BQ8WW43 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
APH1BQ8WW43 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.37■■□□□ 1.01
APH1BQ8WW43 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APH1BQ8WW43 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
APH1BQ8WW43 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.36■■□□□ 1.01
APH1BQ8WW43 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
APH1BQ8WW43 AL162393.1-201ENST00000437852 946 ntBASIC21.36■■□□□ 1.01
APH1BQ8WW43 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
APH1BQ8WW43 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APH1BQ8WW43 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.35■■□□□ 1.01
APH1BQ8WW43 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.35■■□□□ 1.01
APH1BQ8WW43 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
APH1BQ8WW43 DUX4L29-201ENST00000425409 679 ntBASIC21.35■■□□□ 1.01
APH1BQ8WW43 AC008813.1-201ENST00000536597 885 ntBASIC21.35■■□□□ 1.01
APH1BQ8WW43 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
APH1BQ8WW43 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
APH1BQ8WW43 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
APH1BQ8WW43 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.35■■□□□ 1.01
APH1BQ8WW43 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APH1BQ8WW43 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.35■■□□□ 1.01
APH1BQ8WW43 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APH1BQ8WW43 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
APH1BQ8WW43 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
APH1BQ8WW43 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.34■■□□□ 1.01
APH1BQ8WW43 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APH1BQ8WW43 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APH1BQ8WW43 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APH1BQ8WW43 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APH1BQ8WW43 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.34■■□□□ 1.01
APH1BQ8WW43 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
APH1BQ8WW43 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
APH1BQ8WW43 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
APH1BQ8WW43 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APH1BQ8WW43 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APH1BQ8WW43 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
APH1BQ8WW43 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
APH1BQ8WW43 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APH1BQ8WW43 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
APH1BQ8WW43 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APH1BQ8WW43 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
APH1BQ8WW43 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.33■■□□□ 1
APH1BQ8WW43 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.33■■□□□ 1
APH1BQ8WW43 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APH1BQ8WW43 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
APH1BQ8WW43 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.32■■□□□ 1
APH1BQ8WW43 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
APH1BQ8WW43 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.32■■□□□ 1
APH1BQ8WW43 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.31■■□□□ 1
APH1BQ8WW43 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
APH1BQ8WW43 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.31■■□□□ 1
APH1BQ8WW43 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.31■■□□□ 1
APH1BQ8WW43 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APH1BQ8WW43 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.31■■□□□ 1
APH1BQ8WW43 MIR6089-201ENST00000616698 64 ntBASIC21.31■■□□□ 1
APH1BQ8WW43 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.31■■□□□ 1
APH1BQ8WW43 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.31■■□□□ 1
APH1BQ8WW43 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APH1BQ8WW43 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.31■■□□□ 1
APH1BQ8WW43 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.3■■□□□ 1
APH1BQ8WW43 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.3■■□□□ 1
APH1BQ8WW43 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.3■■□□□ 1
APH1BQ8WW43 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APH1BQ8WW43 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.29■■□□□ 1
APH1BQ8WW43 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.29■■□□□ 1
APH1BQ8WW43 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APH1BQ8WW43 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.29■■□□□ 1
APH1BQ8WW43 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APH1BQ8WW43 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.29■■□□□ 1
APH1BQ8WW43 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
APH1BQ8WW43 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.29■■□□□ 1
APH1BQ8WW43 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.28■■□□□ 1
APH1BQ8WW43 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.28■■□□□ 1
APH1BQ8WW43 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.28■■□□□ 1
APH1BQ8WW43 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
APH1BQ8WW43 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.28■■□□□ 1
APH1BQ8WW43 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
APH1BQ8WW43 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
APH1BQ8WW43 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APH1BQ8WW43 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APH1BQ8WW43 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
APH1BQ8WW43 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APH1BQ8WW43 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.27■■□□□ 1
APH1BQ8WW43 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
APH1BQ8WW43 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
APH1BQ8WW43 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
APH1BQ8WW43 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms