Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
CHD6Q8TD26 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22■■□□□ 1.11
CHD6Q8TD26 MIR4767-201ENST00000582827 78 ntBASIC22■■□□□ 1.11
CHD6Q8TD26 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22■■□□□ 1.11
CHD6Q8TD26 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22■■□□□ 1.11
CHD6Q8TD26 AC104771.1-201ENST00000603335 964 ntBASIC22■■□□□ 1.11
CHD6Q8TD26 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD6Q8TD26 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.99■■□□□ 1.11
CHD6Q8TD26 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD6Q8TD26 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD6Q8TD26 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.99■■□□□ 1.11
CHD6Q8TD26 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.99■■□□□ 1.11
CHD6Q8TD26 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.99■■□□□ 1.11
CHD6Q8TD26 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD6Q8TD26 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD6Q8TD26 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.98■■□□□ 1.11
CHD6Q8TD26 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD6Q8TD26 AC008764.7-201ENST00000593779 1081 ntBASIC21.98■■□□□ 1.11
CHD6Q8TD26 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CHD6Q8TD26 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.98■■□□□ 1.11
CHD6Q8TD26 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHD6Q8TD26 TSPY20P-201ENST00000450910 630 ntBASIC21.97■■□□□ 1.11
CHD6Q8TD26 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.97■■□□□ 1.11
CHD6Q8TD26 YBX1P1-201ENST00000445822 960 ntBASIC21.97■■□□□ 1.11
CHD6Q8TD26 AC241377.3-202ENST00000626088 1088 ntBASIC21.96■■□□□ 1.11
CHD6Q8TD26 AC241585.3-202ENST00000628937 1088 ntBASIC21.96■■□□□ 1.11
CHD6Q8TD26 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD6Q8TD26 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD6Q8TD26 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD6Q8TD26 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.96■■□□□ 1.11
CHD6Q8TD26 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CHD6Q8TD26 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHD6Q8TD26 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHD6Q8TD26 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD6Q8TD26 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.94■■□□□ 1.1
CHD6Q8TD26 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD6Q8TD26 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD6Q8TD26 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.94■■□□□ 1.1
CHD6Q8TD26 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.94■■□□□ 1.1
CHD6Q8TD26 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD6Q8TD26 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD6Q8TD26 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CHD6Q8TD26 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.93■■□□□ 1.1
CHD6Q8TD26 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.93■■□□□ 1.1
CHD6Q8TD26 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD6Q8TD26 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.92■■□□□ 1.1
CHD6Q8TD26 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.92■■□□□ 1.1
CHD6Q8TD26 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD6Q8TD26 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD6Q8TD26 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD6Q8TD26 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.91■■□□□ 1.1
CHD6Q8TD26 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD6Q8TD26 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD6Q8TD26 AC011551.1-201ENST00000614101 683 ntBASIC21.91■■□□□ 1.1
CHD6Q8TD26 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD6Q8TD26 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD6Q8TD26 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD6Q8TD26 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CHD6Q8TD26 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD6Q8TD26 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHD6Q8TD26 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHD6Q8TD26 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CHD6Q8TD26 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.89■■□□□ 1.09
CHD6Q8TD26 AC004448.1-201ENST00000458332 883 ntBASIC21.89■■□□□ 1.09
CHD6Q8TD26 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD6Q8TD26 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHD6Q8TD26 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.88■■□□□ 1.09
CHD6Q8TD26 SYT6-210ENST00000641643 1587 ntBASIC21.88■■□□□ 1.09
CHD6Q8TD26 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD6Q8TD26 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD6Q8TD26 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CHD6Q8TD26 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD6Q8TD26 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CHD6Q8TD26 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.87■■□□□ 1.09
CHD6Q8TD26 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.87■■□□□ 1.09
CHD6Q8TD26 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.87■■□□□ 1.09
CHD6Q8TD26 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD6Q8TD26 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD6Q8TD26 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD6Q8TD26 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.87■■□□□ 1.09
CHD6Q8TD26 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD6Q8TD26 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CHD6Q8TD26 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CHD6Q8TD26 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD6Q8TD26 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.86■■□□□ 1.09
CHD6Q8TD26 KRT18P10-201ENST00000388836 1287 ntBASIC21.86■■□□□ 1.09
CHD6Q8TD26 AC008687.6-201ENST00000596318 630 ntBASIC21.86■■□□□ 1.09
CHD6Q8TD26 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD6Q8TD26 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CHD6Q8TD26 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHD6Q8TD26 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CHD6Q8TD26 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.85■■□□□ 1.09
CHD6Q8TD26 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHD6Q8TD26 AC100797.4-201ENST00000631653 1827 ntBASIC21.85■■□□□ 1.09
CHD6Q8TD26 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.85■■□□□ 1.09
CHD6Q8TD26 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD6Q8TD26 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHD6Q8TD26 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHD6Q8TD26 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.85■■□□□ 1.09
CHD6Q8TD26 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms